RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SMARCD2Q92925 531 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 FOXN4Q96NZ1 517 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 NUDT9Q9BW91 350 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 TERTO14746 1132 aaKnown RBP13.45□□□□□ -0.26
CTNS-202ENST00000381870 PMP2P02689 132 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 LYL1P12980 280 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 RPS4XP62701 263 aaKnown RBP13.45□□□□□ -0.26
CTNS-202ENST00000381870 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 SLC35D2Q76EJ3 337 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 JAGN1Q8N5M9 183 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 AQP3Q92482 292 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 OR10C1Q96KK4 312 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 TGM7Q96PF1 710 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 STACQ99469 402 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 ELOVL3Q9HB03 270 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 GAR1Q9NY12 217 aaKnown RBP13.45□□□□□ -0.26
CTNS-202ENST00000381870 POMT1Q9Y6A1 747 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 LDLRAD4O15165 306 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 HOXA2O43364 376 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 IGKV1D-16P01601 117 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 SELPP16109 830 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 CTXN1P60606 82 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 CDK3Q00526 305 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 EGR3Q06889 387 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 SPOCK1Q08629 439 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 ISXQ2M1V0 245 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 FCRL6Q6DN72 434 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 EIF5AL1Q6IS14 154 aaKnown RBP13.44□□□□□ -0.26
CTNS-202ENST00000381870 ZNF574Q6ZN55 896 aaPredicted RBP13.44□□□□□ -0.26
CTNS-202ENST00000381870 FOXRED2Q8IWF2 684 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 OR10D4PQ8NGN7 298 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 TGIF2Q9GZN2 237 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 UCK1Q9HA47 277 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 DHDHQ9UQ10 334 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 A0A087WUJ7 227 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 FGF17O60258 216 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 MPZP25189 248 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 RPS10P46783 165 aaKnown RBP13.44□□□□□ -0.26
CTNS-202ENST00000381870 S100A10P60903 97 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 ZNF260Q3ZCT1 412 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 C10orf53Q8N6V4 93 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 CSNK1A1LQ8N752 337 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 ZNF615Q8N8J6 731 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 CHST4Q8NCG5 386 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 TMEM52Q8NDY8 209 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 GAL3ST3Q96A11 431 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 PPP4R1LQ9P1A2 415 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 MAFFQ9ULX9 164 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 STARD10Q9Y365 291 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 WNT6Q9Y6F9 365 aa13.44□□□□□ -0.26
CTNS-202ENST00000381870 UMAD1C9J7I0 102 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 NME2P1O60361 137 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 HIST1H1BP16401 226 aaKnown RBP13.43□□□□□ -0.26
CTNS-202ENST00000381870 PI3P19957 117 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 PRPS1P60891 318 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 GAMTQ14353 236 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 SSX2Q16385 188 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 MEP1BQ16820 701 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 ITPRIPL2Q3MIP1 535 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 MIDNQ504T8 468 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 OR2A2Q6IF42 318 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 BEND4Q6ZU67 534 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 ERN2Q76MJ5 926 aaKnown RBP13.43□□□□□ -0.26
CTNS-202ENST00000381870 C1QL4Q86Z23 238 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 SEMA6DQ8NFY4 1073 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 CD300LFQ8TDQ1 290 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 ASB5Q8WWX0 329 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 OR8D1Q8WZ84 308 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 CPNE4Q96A23 557 aaPredicted RBP13.43□□□□□ -0.26
CTNS-202ENST00000381870 MOGAT1Q96PD6 335 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 ZNF587Q96SQ5 575 aaPredicted RBP13.43□□□□□ -0.26
CTNS-202ENST00000381870 PRO1933Q9H354 126 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 LMAN1LQ9HAT1 526 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 PARPBPQ9NWS1 579 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 HCFC1R1Q9NWW0 138 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 DOK5Q9P104 306 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 OR1A2Q9Y585 309 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 ARID1AO14497 2285 aa13.43□□□□□ -0.26
CTNS-202ENST00000381870 TSPAN15O95858 294 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 IFNA6P05013 189 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 CST5P28325 142 aaPredicted RBP13.42□□□□□ -0.26
CTNS-202ENST00000381870 SNCAP37840 140 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 MFGE8Q08431 387 aaPredicted RBP13.42□□□□□ -0.26
CTNS-202ENST00000381870 MESP2Q0VG99 397 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 SQSTM1Q13501 440 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 SURF2Q15527 256 aaPredicted RBP13.42□□□□□ -0.26
CTNS-202ENST00000381870 GUK1Q16774 197 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 PHF19Q5T6S3 580 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 TMEM268Q5VZI3 342 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 HEPN1Q6WQI6 88 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 TMEM230Q96A57 120 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 RSPRY1Q96DX4 576 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 RBM14Q96PK6 669 aaKnown RBP13.42□□□□□ -0.26
CTNS-202ENST00000381870 GPX7Q96SL4 187 aaPredicted RBP13.42□□□□□ -0.26
CTNS-202ENST00000381870 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 EIF5A2Q9GZV4 153 aaKnown RBP13.42□□□□□ -0.26
CTNS-202ENST00000381870 GSKIPQ9P0R6 139 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 COLEC10Q9Y6Z7 277 aa13.42□□□□□ -0.26
CTNS-202ENST00000381870 IGKV1D-42A0A075B6H8 117 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms