RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CDHR4A6H8M9 788 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 NKX6-3A6NJ46 265 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF724A8MTY0 619 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 NPIPB8E9PQR5 432 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 H7C417 338 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 TSPAN6O43657 245 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 TACSTD2P09758 323 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 IRF2P14316 349 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 AMD1P17707 334 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 CMPK1P30085 196 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 GCH1P30793 250 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 FRKP42685 505 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SRSF3P84103 164 aaKnown RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 LCN10Q6JVE6 187 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 RNF44Q7L0R7 432 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 METTL27Q8N6F8 245 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 AMER3Q8N944 861 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 TFGQ92734 400 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 G6PC3Q9BUM1 346 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 PARP11Q9NR21 331 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SLC35D1Q9NTN3 355 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 CACFD1Q9UGQ2 172 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 TAC3Q9UHF0 121 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 TMEM269A0A1B0GVZ9 245 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BKO60814 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 GLSO94925 669 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BJP06899 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BOP23527 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HOXD9P28356 352 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BBP33778 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 GABRA4P48169 554 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BDP58876 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BCP62807 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 ACVR1Q04771 509 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SLC14A1Q13336 389 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST2H2BEQ16778 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 TCTEX1D1Q8N7M0 179 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BHQ93079 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 NUS1Q96E22 293 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SDSLQ96GA7 329 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BNQ99877 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BMQ99879 126 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 ARFGEF1Q9Y6D6 1849 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SLC16A8O95907 504 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 BTCP35070 178 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 OR52R1Q8NGF1 315 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 GLYATL1Q969I3 302 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 RAB11FIP5Q9BXF6 653 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 FKRPQ9H9S5 495 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 IL36AQ9UHA7 158 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 VSTM2BA6NLU5 285 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 HBE1P02100 147 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 TTRP02766 147 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SOD3P08294 240 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 CR2P20023 1033 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 CDK2P24941 298 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SPINT3P49223 89 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 SNRPNP63162 240 aaKnown RBP10.72□□□□□ -0.69
NPHP4-202ENST00000378161 BDH1Q02338 343 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 EGR3Q06889 387 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 GFI1BQ5VTD9 330 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 FAM58AQ8N1B3 248 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 KREMEN2Q8NCW0 462 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 MIEN1Q9BRT3 115 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 INPP5EQ9NRR6 644 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 INSL5Q9Y5Q6 135 aa10.72□□□□□ -0.69
NPHP4-202ENST00000378161 FAM166BA8MTA8 275 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 FTCDNL1E5RQL4 147 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 SRPX2O60687 465 aaPredicted RBP10.71□□□□□ -0.69
NPHP4-202ENST00000378161 GPANK1O95872 356 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 C1SP09871 688 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 CT45A8P0DMV1 189 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 CT45A9P0DMV2 189 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 CEACAM8P31997 349 aaPredicted RBP10.71□□□□□ -0.69
NPHP4-202ENST00000378161 GUCA1AP43080 201 aaPredicted RBP10.71□□□□□ -0.69
NPHP4-202ENST00000378161 SEC13P55735 322 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 PIN1Q13526 163 aaPredicted RBP10.71□□□□□ -0.69
NPHP4-202ENST00000378161 CT45A2Q5DJT8 189 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 DPY19L4Q7Z388 723 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF440Q8IYI8 595 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 RXFP3Q9NSD7 469 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 SHANK3Q9BYB0 1731 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF727A8MUV8 499 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 GJB3O75712 270 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 HLA-DQA2P01906 255 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 UBE2V1Q13404 147 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 FBLN7Q53RD9 439 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 MSRB3Q8IXL7 192 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 NRMQ8IXM6 262 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 OR6N2Q8NGY6 317 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 SLC17A9Q9BYT1 436 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 HAO2Q9NYQ3 351 aa10.71□□□□□ -0.69
NPHP4-202ENST00000378161 CDK5RAP2Q96SN8 1893 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 IGLV3-10A0A075B6K4 115 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 MYADML2A6NDP7 307 aa10.71□□□□□ -0.7
NPHP4-202ENST00000378161 M0QYG6 137 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms