RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 GAB2Q9UQC2 676 aa17.29■□□□□ 0.36
TBC1D4-201ENST00000377625 BOLA1Q9Y3E2 137 aa17.29■□□□□ 0.36
TBC1D4-201ENST00000377625 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
TBC1D4-201ENST00000377625 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 A0A1W2PPC4 97 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 FAM157BP0CG42 384 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 CPEP16870 476 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 DBPQ10586 325 aaPredicted RBP17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 ZNF573Q86YE8 665 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 SCARB1Q8WTV0 552 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 SLC7A6Q92536 515 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 MED9Q9NWA0 146 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 MED29Q9NX70 200 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 NDUFA6P56556 154 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 DBX2Q6ZNG2 339 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 MVB12AQ96EY5 273 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 MED18Q9BUE0 208 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 RNF167Q9H6Y7 350 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 ASB1Q9Y576 335 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 ANKRD61A6NGH8 418 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 OR2A14Q96R47 310 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 SLC23A1Q9UHI7 598 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 IGHV3-15A0A0B4J1V0 119 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 REEP6Q96HR9 211 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 SLC25A37Q9NYZ2 338 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 ZNF195O14628 629 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 IGLV3-27P01718 113 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 H2AFB1P0C5Y9 115 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 IGFBP6P24592 240 aaPredicted RBP17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 GNB2P62879 340 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 MRPL58Q14197 206 aaKnown RBP17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 RTL8BQ17RB0 113 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 PAQR6Q6TCH4 344 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 CDC20BQ86Y33 519 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 LFNGQ8NES3 379 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 RBPMSQ93062 196 aaKnown RBP17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 SPACA5Q96QH8 159 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 NUP98P52948 1817 aa17.28■□□□□ 0.36
TBC1D4-201ENST00000377625 TNFSF11O14788 317 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 ADRA2CP18825 462 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 PCK2Q16822 640 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 CCDC74BQ96LY2 380 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 FN3KRPQ9HA64 309 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 CSAG2Q9Y5P2 127 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 MN1Q10571 1320 aaPredicted RBP17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 PRSS37A4D1T9 235 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 XRCC2O43543 280 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 BSGP35613 385 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 CORO2AQ92828 525 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 S1PR5Q9H228 398 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 A0A087WV62 115 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 TMEM235A6NFC5 223 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 FIGNL2A6NMB9 653 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 P2RX3P56373 397 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 EGR3Q06889 387 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 FAM122BQ7Z309 247 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 TMEM104Q8NE00 496 aa17.27■□□□□ 0.36
TBC1D4-201ENST00000377625 LALBAP00709 142 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 ZGLP1P0C6A0 271 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 ZDHHC11BP0C7U3 371 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 DEFA6Q01524 100 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 LSRQ86X29 649 aaPredicted RBP17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 KDF1Q8NAX2 398 aaPredicted RBP17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 ATF6BQ99941 703 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 EDEM2Q9BV94 578 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 GFERP55789 205 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 GABRG1Q8N1C3 465 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 OR52H1Q8NGJ2 320 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 OR8U1Q8NH10 309 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 GABARAPL3Q9BY60 117 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 NMES1Q9C002 83 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 GABARAPL1Q9H0R8 117 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 ZNF331Q9NQX6 463 aaPredicted RBP17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 NDUFB11Q9NX14 153 aa17.27■□□□□ 0.35
TBC1D4-201ENST00000377625 ZAR1LA6NP61 321 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 UPK1AO00322 258 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 DGCR2P98153 550 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 SPANXN5Q5MJ07 72 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 C1orf87Q8N0U7 546 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 BCL7CQ8WUZ0 217 aaPredicted RBP17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 MRGPRX4Q96LA9 322 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 NUDT9Q9BW91 350 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 URGCP-MRPS24S4R325 110 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 XRCC3O43542 346 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 SHBQ15464 509 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 PHYHD1Q5SRE7 291 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 RFC3P40938 356 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 CTU2Q2VPK5 515 aaKnown RBP17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 OTUD1Q5VV17 481 aaPredicted RBP17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 DDOQ99489 341 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 CT45A10P0DMU9 189 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 PNLIPRP2P54317 469 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 EMP3P54852 163 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 EXD3Q8N9H8 876 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 C20orf24Q9BUV8 137 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 NDRG3Q9UGV2 375 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 TMEM265A0A087WTH1 108 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 FAM221AA4D161 298 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 METTL15P1P0C7V9 234 aa17.26■□□□□ 0.35
TBC1D4-201ENST00000377625 EMDP50402 254 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms