RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 OR1S1Q8NH92 325 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 KCNK17Q96T54 332 aa22.6■■□□□ 1.21
C9orf40-201ENST00000376854 EIF1AYO14602 144 aaKnown RBP22.59■■□□□ 1.21
C9orf40-201ENST00000376854 UBCP0CG48 685 aaKnown RBP22.59■■□□□ 1.21
C9orf40-201ENST00000376854 RNF4P78317 190 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 POU3F1Q03052 451 aaPredicted RBP22.59■■□□□ 1.21
C9orf40-201ENST00000376854 DHRS2Q13268 280 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 C17orf107Q6ZR85 190 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 OVCH2Q7RTZ1 564 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 MISPQ8IVT2 679 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 OR13C8Q8NGS7 320 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 OR6S1Q8NH40 331 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 FOXRED1Q96CU9 486 aaPredicted RBP22.59■■□□□ 1.21
C9orf40-201ENST00000376854 MED29Q9NX70 200 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 KRBOX1C9JBD0 128 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 RAB6AP20340 208 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 NXPH1P58417 271 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 DEGS2Q6QHC5 323 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 RHBDD3Q9Y3P4 386 aa22.59■■□□□ 1.21
C9orf40-201ENST00000376854 METTL21EPA6NDL7 271 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 LGALS8O00214 317 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 SMAD9O15198 467 aaKnown RBP22.58■■□□□ 1.21
C9orf40-201ENST00000376854 RLN2P04090 185 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 CD34P28906 385 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 FBXW4P57775 412 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 NKPD1Q17RQ9 610 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 CARFQ8N187 725 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 OR5M8Q8NGP6 311 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 MFSD8Q8NHS3 518 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 AQP3Q92482 292 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 FGGYQ96C11 551 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 PHF7Q9BWX1 381 aaPredicted RBP22.58■■□□□ 1.21
C9orf40-201ENST00000376854 CNTD2Q9H8S5 307 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 SUSD2Q9UGT4 822 aa22.58■■□□□ 1.21
C9orf40-201ENST00000376854 ANKUB1A6NFN9 424 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 DISC1C4P0D8 188 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 TPD52L2O43399 206 aaKnown RBP22.58■■□□□ 1.2
C9orf40-201ENST00000376854 DUX1O43812 170 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 FGF2P09038 288 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 NAGAP17050 411 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 AGTR1P30556 359 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 HSF1Q00613 529 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 CD163Q86VB7 1156 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 ST8SIA1Q92185 356 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 RAB22AQ9UL26 194 aa22.58■■□□□ 1.2
C9orf40-201ENST00000376854 A0A1B0GTI1 187 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 CD8AP01732 235 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 HLA-AP01891 365 aaKnown RBP22.57■■□□□ 1.2
C9orf40-201ENST00000376854 TLE3Q04726 772 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 FGL1Q08830 312 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 MEF2DQ14814 521 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 CDNFQ49AH0 187 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 TMEM81Q6P7N7 255 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 FJX1Q86VR8 437 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 BVESQ8NE79 360 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 RNF133Q8WVZ7 376 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 PMEPA1Q969W9 287 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 NOP16Q9Y3C1 178 aaKnown RBP22.57■■□□□ 1.2
C9orf40-201ENST00000376854 KIF26BQ2KJY2 2108 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 OR5H14A6NHG9 310 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 BDKRB2P30411 391 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 MMP16P51512 607 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 CAPZA1P52907 286 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 RAB12Q6IQ22 244 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 PLPP5Q8NEB5 264 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 THAP3Q8WTV1 239 aaPredicted RBP22.57■■□□□ 1.2
C9orf40-201ENST00000376854 SHARPINQ9H0F6 387 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 VDAC3Q9Y277 283 aa22.57■■□□□ 1.2
C9orf40-201ENST00000376854 WIPF3A6NGB9 483 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 GNALP38405 381 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 ZNF260Q3ZCT1 412 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 ZNF813Q6ZN06 617 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 HSD17B13Q7Z5P4 300 aaPredicted RBP22.56■■□□□ 1.2
C9orf40-201ENST00000376854 TRAPPC6BQ86SZ2 158 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 CMBLQ96DG6 245 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 C5orf34Q96MH7 638 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 CHST11Q9NPF2 352 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 VSIG4Q9Y279 399 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 UNC13CQ8NB66 2214 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 RAB27BO00194 218 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 ZNF354AO60765 605 aaPredicted RBP22.56■■□□□ 1.2
C9orf40-201ENST00000376854 LIPCP11150 499 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 MGMTP16455 207 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 APOBEC1P41238 236 aaKnown RBP22.56■■□□□ 1.2
C9orf40-201ENST00000376854 EIF1AXP47813 144 aaKnown RBP22.56■■□□□ 1.2
C9orf40-201ENST00000376854 C17orf67Q0P5P2 114 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 BTN1A1Q13410 526 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 RNASE10Q5GAN6 216 aaKnown RBP22.56■■□□□ 1.2
C9orf40-201ENST00000376854 PHF19Q5T6S3 580 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 LIN54Q6MZP7 749 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 LPCAT3Q6P1A2 487 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 ARSKQ6UWY0 536 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 ZBTB8AQ96BR9 441 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 PRRT1Q99946 306 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 DUSP15Q9H1R2 295 aaPredicted RBP22.56■■□□□ 1.2
C9orf40-201ENST00000376854 FGF21Q9NSA1 209 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 FAM206AQ9NX38 181 aa22.56■■□□□ 1.2
C9orf40-201ENST00000376854 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 A0A0D9SG52 128 aa22.55■■□□□ 1.2
C9orf40-201ENST00000376854 CPED1A4D0V7 1026 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms