RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ZP4Q12836 540 aa13□□□□□ -0.33
MSH5-201ENST00000375703 TAF13Q15543 124 aa13□□□□□ -0.33
MSH5-201ENST00000375703 CDNFQ49AH0 187 aa13□□□□□ -0.33
MSH5-201ENST00000375703 C16orf47Q6ZP98 133 aaPredicted RBP13□□□□□ -0.33
MSH5-201ENST00000375703 H1FNTQ75WM6 255 aaPredicted RBP13□□□□□ -0.33
MSH5-201ENST00000375703 HSD17B13Q7Z5P4 300 aaPredicted RBP13□□□□□ -0.33
MSH5-201ENST00000375703 STPG2Q8N412 459 aa13□□□□□ -0.33
MSH5-201ENST00000375703 NKAIN3Q8N8D7 197 aa13□□□□□ -0.33
MSH5-201ENST00000375703 RELL2Q8NC24 303 aaPredicted RBP13□□□□□ -0.33
MSH5-201ENST00000375703 OR5M8Q8NGP6 311 aa13□□□□□ -0.33
MSH5-201ENST00000375703 PDCD10Q9BUL8 212 aa13□□□□□ -0.33
MSH5-201ENST00000375703 CNTD2Q9H8S5 307 aa13□□□□□ -0.33
MSH5-201ENST00000375703 SEC16AO15027 2179 aa13□□□□□ -0.33
MSH5-201ENST00000375703 IGKV1D-43A0A0B4J1Z2 117 aa13□□□□□ -0.33
MSH5-201ENST00000375703 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
MSH5-201ENST00000375703 RAB6AP20340 208 aa13□□□□□ -0.33
MSH5-201ENST00000375703 DAP3P51398 398 aaKnown RBP13□□□□□ -0.33
MSH5-201ENST00000375703 MEF2DQ14814 521 aa13□□□□□ -0.33
MSH5-201ENST00000375703 PCK2Q16822 640 aa13□□□□□ -0.33
MSH5-201ENST00000375703 RAB12Q6IQ22 244 aa13□□□□□ -0.33
MSH5-201ENST00000375703 DEGS2Q6QHC5 323 aa13□□□□□ -0.33
MSH5-201ENST00000375703 LYPD6Q86Y78 171 aa13□□□□□ -0.33
MSH5-201ENST00000375703 WDFY1Q8IWB7 410 aa13□□□□□ -0.33
MSH5-201ENST00000375703 CHST4Q8NCG5 386 aa13□□□□□ -0.33
MSH5-201ENST00000375703 ZBTB44Q8NCP5 570 aa13□□□□□ -0.33
MSH5-201ENST00000375703 LHFPL5Q8TAF8 219 aa13□□□□□ -0.33
MSH5-201ENST00000375703 ST8SIA4Q92187 359 aa13□□□□□ -0.33
MSH5-201ENST00000375703 SEC22AQ96IW7 307 aa13□□□□□ -0.33
MSH5-201ENST00000375703 COMMD9Q9P000 198 aa13□□□□□ -0.33
MSH5-201ENST00000375703 GPN3Q9UHW5 284 aaPredicted RBP13□□□□□ -0.33
MSH5-201ENST00000375703 IGHV1OR21-1A0A087WYE8 117 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 IGHV3-20A0A0C4DH32 117 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 HLA-AP01891 365 aaKnown RBP12.99□□□□□ -0.33
MSH5-201ENST00000375703 LIPCP11150 499 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 NAGAP17050 411 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 BDKRB2P30411 391 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 GNALP38405 381 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 RNF4P78317 190 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 CFHR1Q03591 330 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 ZNF260Q3ZCT1 412 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 RNASE10Q5GAN6 216 aaKnown RBP12.99□□□□□ -0.33
MSH5-201ENST00000375703 FJX1Q86VR8 437 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 PLXDC1Q8IUK5 500 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 ST8SIA2Q92186 375 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 AQP3Q92482 292 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 KCNK17Q96T54 332 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 SLC25A32Q9H2D1 315 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 TMEM185BQ9H7F4 350 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 MED29Q9NX70 200 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 SUSD2Q9UGT4 822 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 GPR160Q9UJ42 338 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 VSIG4Q9Y279 399 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 LOC100509620A0A075B734 347 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 A0A1B0GTI1 187 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 OR14I1A6ND48 311 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 ADAM10O14672 748 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 UBBP0CG47 229 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 CAPZA1P52907 286 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 RPS27AP62979 156 aaKnown RBP12.99□□□□□ -0.33
MSH5-201ENST00000375703 UBA52P62987 128 aaKnown RBP12.99□□□□□ -0.33
MSH5-201ENST00000375703 POU3F1Q03052 451 aaPredicted RBP12.99□□□□□ -0.33
MSH5-201ENST00000375703 C3orf33Q6P1S2 294 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 ZNF813Q6ZN06 617 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 MISPQ8IVT2 679 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 D2HGDHQ8N465 521 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 PXT1Q8NFP0 134 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 OR6S1Q8NH40 331 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 MFSD8Q8NHS3 518 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 CMBLQ96DG6 245 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 PRRT1Q99946 306 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 MS4A7Q9GZW8 240 aaPredicted RBP12.99□□□□□ -0.33
MSH5-201ENST00000375703 GLS2Q9UI32 602 aa12.99□□□□□ -0.33
MSH5-201ENST00000375703 A0A1B0GX78 115 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 WIPF3A6NGB9 483 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 TMEM200CA6NKL6 621 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 RAB27BO00194 218 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 FREM3P0C091 2139 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 MMP16P51512 607 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 FOXL2P58012 376 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 TLE3Q04726 772 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 C17orf67Q0P5P2 114 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 LRRC37A5PQ49AS3 106 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 LPCAT3Q6P1A2 487 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
MSH5-201ENST00000375703 EIF4E3Q8N5X7 224 aaKnown RBP12.98□□□□□ -0.33
MSH5-201ENST00000375703 THAP3Q8WTV1 239 aaPredicted RBP12.98□□□□□ -0.33
MSH5-201ENST00000375703 FAM46BQ96A09 425 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 RHBDD3Q9Y3P4 386 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 CPED1A4D0V7 1026 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 ANKUB1A6NFN9 424 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 CCSO14618 274 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 APOBEC1P41238 236 aaKnown RBP12.98□□□□□ -0.33
MSH5-201ENST00000375703 EIF1AXP47813 144 aaKnown RBP12.98□□□□□ -0.33
MSH5-201ENST00000375703 FBXW4P57775 412 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 HSF1Q00613 529 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 SRSF4Q08170 494 aaKnown RBP12.98□□□□□ -0.33
MSH5-201ENST00000375703 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 C11orf87Q6NUJ2 197 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms