RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 MED22Q15528 200 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 TP53I3Q53FA7 332 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 HIST2H3PS2Q5TEC6 136 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 TMEM53Q6P2H8 277 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 LRRN1Q6UXK5 716 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 STAC2Q6ZMT1 411 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 HIST2H3AQ71DI3 136 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 RNF133Q8WVZ7 376 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 SPRYD4Q8WW59 207 aaPredicted RBP15.28■□□□□ 0.04
PFDN6-201ENST00000374606 RORBQ92753 470 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 BOD1Q96IK1 185 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 MROQ9BYG7 248 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 OR2H1Q9GZK4 316 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 HDHD2Q9H0R4 259 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 CENPMQ9NSP4 180 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 SLCO1C1Q9NYB5 712 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 PLEK2Q9NYT0 353 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 ZNF224Q9NZL3 707 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 LSM2Q9Y333 95 aaKnown RBP15.28■□□□□ 0.04
PFDN6-201ENST00000374606 TIMM10BQ9Y5J6 103 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 SPG11Q96JI7 2443 aa15.28■□□□□ 0.04
PFDN6-201ENST00000374606 ARPC4-TTLL3A0A0A6YYG9 625 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 MAGEB4O15481 346 aaPredicted RBP15.27■□□□□ 0.04
PFDN6-201ENST00000374606 SGCEO43556 437 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 SULT1C4O75897 302 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 LCKP06239 509 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 MMP7P09237 267 aaPredicted RBP15.27■□□□□ 0.04
PFDN6-201ENST00000374606 H2BFMP0C1H6 154 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 PATE4P0C8F1 98 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 HOXB1P14653 301 aaPredicted RBP15.27■□□□□ 0.04
PFDN6-201ENST00000374606 ARR3P36575 388 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 TUBA1BP68363 451 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 SPHARQ15513 63 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 TAF13Q15543 124 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 ELFN2Q5R3F8 820 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 XAF1Q6GPH4 301 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 MEX3BQ6ZN04 569 aaKnown RBP15.27■□□□□ 0.04
PFDN6-201ENST00000374606 TUBA1AQ71U36 451 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 ZNF679Q8IYX0 411 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 YIPF7Q8N8F6 280 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 STEAP2Q8NFT2 490 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 OR10S1Q8NGN2 331 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 FGFBP3Q8TAT2 258 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 CA5BP1Q8WTZ4 195 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 OR5M11Q96RB7 305 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 HDHD5Q9BXW7 423 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 ISG20L2Q9H9L3 353 aaKnown RBP15.27■□□□□ 0.04
PFDN6-201ENST00000374606 OBP2BQ9NPH6 170 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 PNRC2Q9NPJ4 139 aaKnown RBP15.27■□□□□ 0.04
PFDN6-201ENST00000374606 SLC17A5Q9NRA2 495 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 MRM2Q9UI43 246 aaKnown RBP15.27■□□□□ 0.04
PFDN6-201ENST00000374606 LRP12Q9Y561 859 aa15.27■□□□□ 0.04
PFDN6-201ENST00000374606 ABCA2Q9BZC7 2435 aa15.27■□□□□ 0.03
PFDN6-201ENST00000374606 METTL15A6NJ78 407 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 OR5H1A6NKK0 313 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ZNF254O75437 659 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 TACSTD2P09758 323 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 PSMB9P28065 219 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 OPRL1P41146 370 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 RIDAP52758 137 aaKnown RBP15.26■□□□□ 0.03
PFDN6-201ENST00000374606 NR1H2P55055 460 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 OR12D2P58182 307 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 PSG4Q00888 419 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 GSG1Q2KHT4 349 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 CCDC92Q53HC0 331 aaPredicted RBP15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ZNF684Q5T5D7 378 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 UBE2UQ5VVX9 321 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ZNF774Q6NX45 483 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 DEGS2Q6QHC5 323 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 VASH1Q7L8A9 365 aaPredicted RBP15.26■□□□□ 0.03
PFDN6-201ENST00000374606 KCTD20Q7Z5Y7 419 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ACBD4Q8NC06 268 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 GATAD2BQ8WXI9 593 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 LRRC46Q96FV0 321 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ATF6BQ99941 703 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ELOVL3Q9HB03 270 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 NOX3Q9HBY0 568 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 TRIM36Q9NQ86 728 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 DDX28Q9NUL7 540 aaKnown RBP15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ACOXLQ9NUZ1 547 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 AMDHD2Q9Y303 409 aa15.26■□□□□ 0.03
PFDN6-201ENST00000374606 ZNF503-AS2A6NEH8 195 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 ABHD16AO95870 558 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 HSMCR30P0CW71 290 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 HSD11B1P28845 292 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 CCKARP32238 428 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 HTR5AP47898 357 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 GBX2P52951 348 aaPredicted RBP15.25■□□□□ 0.03
PFDN6-201ENST00000374606 RAB1AP62820 205 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 GRB2P62993 217 aaKnown RBP15.25■□□□□ 0.03
PFDN6-201ENST00000374606 FAM27E3Q08E93 113 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 ECH1Q13011 328 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 MRPL28Q13084 256 aaKnown RBP15.25■□□□□ 0.03
PFDN6-201ENST00000374606 PABPC1L2AQ5JQF8 200 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 RHOUQ7L0Q8 258 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 KLBQ86Z14 1044 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 EGFL6Q8IUX8 553 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 ALDH16A1Q8IZ83 802 aa15.25■□□□□ 0.03
PFDN6-201ENST00000374606 ZNF485Q8NCK3 441 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms