RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 IQCMA0A1B0GVH7 501 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 A0A1W2PR80 420 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 IGLV1-44P01699 117 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 APOC1P02654 83 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 PLA2G2AP14555 144 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 ZNF14P17017 642 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-204ENST00000372243 CRYGSP22914 178 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 RIDAP52758 137 aaKnown RBP13.79□□□□□ -0.2
TMEM53-204ENST00000372243 OR12D2P58182 307 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 ACSM1Q08AH1 577 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 SPHARQ15513 63 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 KRTAP27-1Q3LI81 207 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 TP53I3Q53FA7 332 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 UBE2UQ5VVX9 321 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 ZNF584Q8IVC4 421 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 CPEB3Q8NE35 698 aaKnown RBP13.79□□□□□ -0.2
TMEM53-204ENST00000372243 SPRYD4Q8WW59 207 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-204ENST00000372243 KCNJ15Q99712 375 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 MRPS26Q9BYN8 205 aaKnown RBP13.79□□□□□ -0.2
TMEM53-204ENST00000372243 ISG20L2Q9H9L3 353 aaKnown RBP13.79□□□□□ -0.2
TMEM53-204ENST00000372243 BABAM2Q9NXR7 383 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 GNG8Q9UK08 70 aa13.79□□□□□ -0.2
TMEM53-204ENST00000372243 J3QLW9 94 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 PSMD9O00233 223 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 MAGEB4O15481 346 aaPredicted RBP13.78□□□□□ -0.2
TMEM53-204ENST00000372243 ZNF19P17023 458 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 HSD11B1P28845 292 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 PEX19P40855 299 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 MAP2K4P45985 399 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 HTR5AP47898 357 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 BDH1Q02338 343 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 RAB39AQ14964 217 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 TAF13Q15543 124 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 LIPNQ5VXI9 398 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 XAF1Q6GPH4 301 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 KCTD8Q6ZWB6 473 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 SPATC1Q76KD6 591 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 YIPF7Q8N8F6 280 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 SPTSSAQ969W0 71 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 PELI1Q96FA3 418 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 VCX3AQ9NNX9 186 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 ISYNA1Q9NPH2 558 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 NDRG3Q9UGV2 375 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 HCFC1P51610 2035 aa13.78□□□□□ -0.2
TMEM53-204ENST00000372243 J3QKU1 62 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 AGFG2O95081 481 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 ATP6V1B1P15313 513 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 STOMP27105 288 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 MMP16P51512 607 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 MED22Q15528 200 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 RSPO1Q2MKA7 263 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-204ENST00000372243 CCDC58Q4VC31 144 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 C22orf34Q6ZV56 151 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 ZNF367Q7RTV3 350 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 GATAD2BQ8WXI9 593 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 OR5M11Q96RB7 305 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 DCLRE1CQ96SD1 692 aaKnown RBP13.77□□□□□ -0.21
TMEM53-204ENST00000372243 TRIM36Q9NQ86 728 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 ACOXLQ9NUZ1 547 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 CACNA1CQ13936 2221 aa13.77□□□□□ -0.21
TMEM53-204ENST00000372243 SRSF10O75494 262 aaKnown RBP13.76□□□□□ -0.21
TMEM53-204ENST00000372243 CLPTM1O96005 669 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 JUNBP17275 347 aaPredicted RBP13.76□□□□□ -0.21
TMEM53-204ENST00000372243 APEX1P27695 318 aaKnown RBP13.76□□□□□ -0.21
TMEM53-204ENST00000372243 APLNRP35414 380 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 TGM4P49221 684 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 GBX2P52951 348 aaPredicted RBP13.76□□□□□ -0.21
TMEM53-204ENST00000372243 TPTEP56180 551 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 TAS2R43P59537 309 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 FDX2Q6P4F2 183 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 DRAM2Q6UX65 266 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 SEZ6L2Q6UXD5 910 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 IL17RDQ8NFM7 739 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 RORBQ92753 470 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 POM121L2Q96KW2 1035 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 SCOCQ9UIL1 159 aa13.76□□□□□ -0.21
TMEM53-204ENST00000372243 LOC100509620A0A075B734 347 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 CLEC18AA5D8T8 446 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 ACOD1A6NK06 481 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 PYCARD-AS1I3L0S3 204 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 M0R135 149 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 LCKP06239 509 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 THBDP07204 575 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 GRNP28799 593 aaKnown RBP13.75□□□□□ -0.21
TMEM53-204ENST00000372243 GDI2P50395 445 aaKnown RBP13.75□□□□□ -0.21
TMEM53-204ENST00000372243 IDH3GP51553 393 aaPredicted RBP13.75□□□□□ -0.21
TMEM53-204ENST00000372243 PSMA6P60900 246 aaKnown RBP13.75□□□□□ -0.21
TMEM53-204ENST00000372243 TBC1D28Q2M2D7 210 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 ZNF829Q3KNS6 432 aaPredicted RBP13.75□□□□□ -0.21
TMEM53-204ENST00000372243 SYT6Q5T7P8 510 aaPredicted RBP13.75□□□□□ -0.21
TMEM53-204ENST00000372243 CLEC18BQ6UXF7 455 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 KLBQ86Z14 1044 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 CLEC18CQ8NCF0 446 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 SLC30A7Q8NEW0 376 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 OR1J2Q8NGS2 313 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
TMEM53-204ENST00000372243 ZNF799Q96GE5 643 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 COG8Q96MW5 612 aa13.75□□□□□ -0.21
TMEM53-204ENST00000372243 WFIKKN1Q96NZ8 548 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms