RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MS4A15Q8N5U1 240 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 FNDC9Q8TBE3 224 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 PHYHIPQ92561 330 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 TMED9Q9BVK6 235 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 CXorf36Q9H7Y0 433 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 BABAM2Q9NXR7 383 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 CALML5Q9NZT1 146 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 FBXO9Q9UK97 447 aaPredicted RBP13.2□□□□□ -0.3
LMO4-201ENST00000370542 SLC13A4Q9UKG4 626 aa13.2□□□□□ -0.3
LMO4-201ENST00000370542 ROS1P08922 2347 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 TRAV1-2A0A0B4J238 106 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 A0A1W2PQD3 144 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 TSPAN4O14817 238 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SULT1B1O43704 296 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SC5DO75845 299 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 ACSM4P0C7M7 580 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 NID1P14543 1247 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 FPR3P25089 353 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 ATP6V1E1P36543 226 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 S100A12P80511 92 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 FLI1Q01543 452 aaPredicted RBP13.19□□□□□ -0.3
LMO4-201ENST00000370542 ST3GAL3Q11203 375 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 HSPB3Q12988 150 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 PON3Q15166 354 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 MAPK14Q16539 360 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 ZNF311Q5JNZ3 666 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SMARCD3Q6STE5 483 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 FAM214BQ7L5A3 538 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 LRRC75A-AS1Q8N1F1 130 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 IQCF1Q8N6M8 205 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 ACBD7Q8N6N7 88 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SLC16A11Q8NCK7 471 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 WFDC11Q8NEX6 87 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 OR5M1Q8NGP8 315 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 OR5AK3PQ8NH89 298 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SFXN5Q8TD22 340 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SPRYD4Q8WW59 207 aaPredicted RBP13.19□□□□□ -0.3
LMO4-201ENST00000370542 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 ZNF845Q96IR2 970 aaPredicted RBP13.19□□□□□ -0.3
LMO4-201ENST00000370542 C18orf12Q96KH6 178 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SLC35G5Q96KT7 338 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 MS4A4EQ96PG1 132 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 OPN3Q9H1Y3 402 aaPredicted RBP13.19□□□□□ -0.3
LMO4-201ENST00000370542 NANSQ9NR45 359 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 PLSCR4Q9NRQ2 329 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 SIRT3Q9NTG7 399 aaPredicted RBP13.19□□□□□ -0.3
LMO4-201ENST00000370542 SDHAF2Q9NX18 166 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 FBXL3Q9UKT7 428 aa13.19□□□□□ -0.3
LMO4-201ENST00000370542 RAI1Q7Z5J4 1906 aaPredicted RBP13.18□□□□□ -0.3
LMO4-201ENST00000370542 NUP214P35658 2090 aaPredicted RBP13.18□□□□□ -0.3
LMO4-201ENST00000370542 SNRPGP15A8MWD9 76 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 H3BML4 177 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 FZD7O75084 574 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 AQP8O94778 261 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 RGS11O94810 467 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 IL5P05113 134 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 HEXAP06865 529 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 IGFBP1P08833 259 aaPredicted RBP13.18□□□□□ -0.3
LMO4-201ENST00000370542 FCGR2AP12318 317 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 PAICSP22234 425 aaKnown RBP13.18□□□□□ -0.3
LMO4-201ENST00000370542 CAV3P56539 151 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 ZNF273Q14593 569 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 DUSP5Q16690 384 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 SHEQ5VZ18 495 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 SFXN4Q6P4A7 337 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 CLEC9AQ6UXN8 241 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 TMEM91Q6ZNR0 172 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 C22orf34Q6ZV56 151 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 ZAR1Q86SH2 424 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 MISPQ8IVT2 679 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 CNEP1R1Q8N9A8 125 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 ZNF610Q8N9Z0 462 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 OR11H4Q8NGC9 324 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 SCARB1Q8WTV0 552 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 ZBTB8AQ96BR9 441 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 STACQ99469 402 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 RERGLQ9H628 205 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 UBQLN4Q9NRR5 601 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 DUSP22Q9NRW4 184 aa13.18□□□□□ -0.3
LMO4-201ENST00000370542 TRAV6A0A075B6T7 132 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 HMSDA8MTL9 139 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 A8MXK9 166 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 C16orf97H3BN30 126 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 L7N2F9 121 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 HMGN4O00479 90 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 SURF4O15260 269 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 MPC2O95563 127 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 MT-ND5P03915 603 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 CD1AP06126 327 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 NR2F1P10589 423 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 PRKACAP17612 351 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 BLVRAP53004 296 aa13.17□□□□□ -0.3
LMO4-201ENST00000370542 RAC1P63000 192 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms