RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SLC17A1Q14916 467 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 KCNRGQ8N5I3 272 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR2G2Q8NGZ5 317 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR4A16Q8NH70 328 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 NTNG1Q9Y2I2 539 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 GLB1P16278 677 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 RAB1AP62820 205 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 MPPED2Q15777 294 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 CNEP1R1Q8N9A8 125 aa10.96□□□□□ -0.65
CDC42BPA-203ENST00000366766 SRFP11831 508 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 CSNK1EP49674 416 aaKnown RBP10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 SMAD4Q13485 552 aaKnown RBP10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 UBALD2Q8IYN6 164 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 NLGN4XQ8N0W4 816 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 CA13Q8N1Q1 262 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 UBE2FQ969M7 185 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 SAMD10Q9BYL1 202 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 TNFRSF12AQ9NP84 129 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 PHF1O43189 567 aaPredicted RBP10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 ERV3-1Q14264 604 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEM81Q6P7N7 255 aa10.96□□□□□ -0.66
CDC42BPA-203ENST00000366766 SNRNP70P08621 437 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 SHHQ15465 462 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 LSRQ86X29 649 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 SLAMF6Q96DU3 332 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 TBXA2RP21731 343 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 TGM1P22735 817 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 SNTB1Q13884 538 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZNF385BQ569K4 471 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZNF683Q8IZ20 524 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 GABRG1Q8N1C3 465 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 LIN37Q96GY3 246 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 RTL8AQ9BWD3 113 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 A0A0B4J2E0 115 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 A0A1B0GX12 115 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 PLPP2O43688 288 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 OR52N5Q8NH56 324 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 DOPEY2Q9Y3R5 2298 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 ANKRD16Q6P6B7 361 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 MARCH3Q86UD3 253 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 TEX19Q8NA77 164 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 EGLN1Q9GZT9 426 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 A0A087WUJ7 227 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 ANKRD61A6NGH8 418 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 CBX7O95931 251 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 FLI1Q01543 452 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 XAF1Q6GPH4 301 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 STAC2Q6ZMT1 411 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 TCN2P20062 427 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 PCBP3P57721 371 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 OGFOD3Q6PK18 319 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZNF808Q8N4W9 903 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 SLC17A2O00624 439 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 ETHE1O95571 254 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 BTG2P78543 158 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 MRPS34P82930 218 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 C15orf54Q8N8G6 183 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZNF107Q9UII5 783 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 DIDO1Q9BTC0 2240 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 A0A1B0GV50 99 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 CLEC2LP0C7M8 214 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 DTYMKP23919 212 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 SKA3Q8IX90 412 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 OR2A1Q8NGT9 310 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 C10orf90Q96M02 699 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 TIMM8AO60220 97 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 SMIM15Q7Z3B0 74 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEM179BQ7Z7N9 219 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 SYT9Q86SS6 491 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEM99Q8N816 258 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 MRGPRX1Q96LB2 322 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 PHF7Q9BWX1 381 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 RNF24Q9Y225 148 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 CHST2Q9Y4C5 530 aa10.95□□□□□ -0.66
CDC42BPA-203ENST00000366766 A0A0B4J2A0 478 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 RPS10-NUDT3A0A1W2PQS6 291 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 M0R135 149 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 PPP1R2P9O14990 202 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 FOLR1P15328 257 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 RPS10P46783 165 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 PRR18Q8N4B5 295 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 CISD2Q8N5K1 135 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZNF799Q96GE5 643 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 GAREM1Q9H706 876 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 SHPKQ9UHJ6 478 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 OR51B4Q9Y5P0 310 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 PCK2Q16822 640 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZBTB37Q5TC79 503 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 MOB1BQ7L9L4 216 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 DLL4Q9NR61 685 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 CLDN1O95832 211 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEM240Q5SV17 173 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 OR2W3Q7Z3T1 314 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 ATF6BQ99941 703 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 GALNT16Q8N428 558 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 NKX6-3A6NJ46 265 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 CTSLP07711 333 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms