RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 PSMC3P17980 439 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 PGAM1P18669 254 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 GSTM3P21266 225 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 F2RP25116 425 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 TNFSF9P41273 254 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 FABP6P51161 128 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 GFERP55789 205 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 CLDN18P56856 261 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 KRTAP10-10P60014 251 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 RPS15AP62244 130 aaKnown RBP1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 ERCC8Q13216 396 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 KIR2DS1Q14954 304 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 IRF4Q15306 451 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 RPEL1Q2QD12 228 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 CHRFAM7AQ494W8 412 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 LINC00483Q53H64 154 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 GCSAMLQ5JQS6 135 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 STUMQ69YW2 141 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 SPESP1Q6UW49 350 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 TIFABQ6ZNK6 161 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 MBOAT2Q6ZWT7 520 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 CMC1Q7Z7K0 106 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 LUZP2Q86TE4 346 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 CDKL3Q8IVW4 592 aaPredicted RBP1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 KATNAL2Q8IYT4 538 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 PGAM4Q8N0Y7 254 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 OR10W1Q8NGF6 305 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 GLYATL2Q8WU03 294 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 RPEQ96AT9 228 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 ZNF317Q96PQ6 595 aaPredicted RBP1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 VCXQ9H320 206 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 ZNF355PQ9NSJ1 428 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 C20orf96Q9NUD7 363 aaPredicted RBP1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 AHSPQ9NZD4 102 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 PDP1Q9P0J1 537 aaPredicted RBP1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 UVRAGQ9P2Y5 699 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 RFNGQ9Y644 331 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 MROH7-TTC4A0A0A0MT08 1334 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 PCDH11XQ9BZA7 1347 aa1.33□□□□□ -2.2
RNU4-56P-201ENST00000364700 IGHV3OR16-9A0A0B4J2B5 98 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 IGHV1OR15-9A0A0B4J2B8 117 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 TMEM223A0PJW6 202 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 SMCO2A6NFE2 343 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 COLCA2A8K830 154 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 H0YIV9 168 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 H0YJW9 148 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 H7C1H1 209 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 BCKDKO14874 412 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 AKR7A2O43488 359 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 FCN3O75636 299 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 GABARAPO95166 117 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 CTDNEP1O95476 244 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 HLA-HP01893 362 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 HBE1P02100 147 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 HLA-DPB1P04440 258 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 TPM2P07951 284 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 CLTAP09496 248 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 LINC00869P0C866 280 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 PGA5P0DJD9 388 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 MUC1P15941 1255 aaPredicted RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 GABRG2P18507 467 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 GGT1P19440 569 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 CSNK2A2P19784 350 aaPredicted RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 USF1P22415 310 aaPredicted RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 U2AF2P26368 475 aaKnown RBP eCLIP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 GTF2E2P29084 291 aaKnown RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 CD70P32970 193 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 LONP1P36776 959 aaKnown RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 CEACAM3P40198 252 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 PMELP40967 661 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 UQCRFS1P47985 274 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 SYNJ2BPP57105 145 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 ZNF121P58317 390 aaPredicted RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 EIF3EP60228 445 aaKnown RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 UBE2MP61081 183 aaKnown RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 PPP1CBP62140 327 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 CDH17Q12864 832 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 NCF4Q15080 339 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 QPRTQ15274 297 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 STK11Q15831 433 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 UBE2SQ16763 222 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 KRTAP13-2Q52LG2 175 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 C5orf47Q569G3 176 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 ZNF684Q5T5D7 378 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 METTL21CQ5VZV1 264 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 LINC00336Q6ZUF6 198 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 SSX9Q7RTT3 188 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 SLC16A13Q7RTY0 426 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 OAFQ86UD1 273 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 RIMKLAQ8IXN7 391 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 UBALD2Q8IYN6 164 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 COMMD1Q8N668 190 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 TTC29Q8NA56 475 aaPredicted RBP1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 LRRC75AQ8NAA5 344 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 BPIFCQ8NFQ6 507 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 OR8U1Q8NH10 309 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 FAM81AQ8TBF8 368 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 CIRBP-AS1Q8TBR5 109 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 PIFOQ8TCI5 191 aa1.32□□□□□ -2.2
RNU4-56P-201ENST00000364700 TMEM230Q96A57 120 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms