RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PALLDQ8WX93 1383 aa1.59□□□□□ -2.16
RNU6-553P-201ENST00000364047 SEC16AO15027 2179 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 IGHV3-72A0A0B4J1Y9 119 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 IGHV1-3A0A0C4DH29 117 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 OR5H1A6NKK0 313 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 LRRIQ3A6PVS8 624 aaPredicted RBP1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 GABRR3A8MPY1 467 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 KRBOX1C9JBD0 128 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 NDUFC2-KCTD14E9PQ53 114 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 J3QRE1 110 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 NVLO15381 856 aaKnown RBP1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 CDC40O60508 579 aaKnown RBP eCLIP1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 PAHP00439 452 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 SYKP43405 635 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 GFERP55789 205 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 RPL23P62829 140 aaKnown RBP1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 ADARB1P78563 741 aaKnown RBP1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 TGM3Q08188 693 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 IL24Q13007 206 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 GPM6BQ13491 265 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 FAM53BQ14153 422 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 STUMQ69YW2 141 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 NIPA1Q7RTP0 329 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 OR5T1Q8NG75 326 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 CCDC126Q96EE4 140 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 ATP5SQ99766 215 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 GON7Q9BXV9 100 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 TMEM9BQ9NQ34 198 aa1.58□□□□□ -2.16
RNU6-553P-201ENST00000364047 NLRC5Q86WI3 1866 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 OR6C70A6NIJ9 312 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 CEACAM18A8MTB9 384 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 DEDDO75618 318 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 LHBP01229 141 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 SERPINA5P05154 406 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 MX1P20591 662 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 IDH2P48735 452 aaKnown RBP1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 PRR3P79522 188 aaKnown RBP1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 MEF2CQ06413 473 aaPredicted RBP1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 ZNF726P1Q15940 193 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 GPR107Q5VW38 600 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 SASS6Q6UVJ0 657 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 TMEM150AQ86TG1 271 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 OR11H7Q8NGC8 314 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 PHOSPHO2Q8TCD6 241 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 TMEM230Q96A57 120 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 DUS3LQ96G46 650 aaKnown RBP1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 ZFP3Q96NJ6 502 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 TSGA13Q96PP4 275 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 CHCHD7Q9BUK0 85 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 C1orf50Q9BV19 199 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 RHBDL2Q9NX52 303 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 SUN2Q9UH99 717 aa1.57□□□□□ -2.16
RNU6-553P-201ENST00000364047 ARPC4-TTLL3A0A0A6YYG9 625 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 IGKV1-8A0A0C4DH67 115 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 H7C417 338 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 EIF4E2O60573 245 aaKnown RBP1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 KLHL41O60662 606 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 CNMDO75829 334 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 GLSO94925 669 aaPredicted RBP1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 KLHL2O95198 593 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 ACSM4P0C7M7 580 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 ZNF43P17038 809 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 HNRNPH3P31942 346 aaKnown RBP1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 FOXN2P32314 431 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 NSG1P42857 185 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 BST2Q10589 180 aaKnown RBP1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 IHHQ14623 411 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 MAD2L1BPQ15013 274 aaPredicted RBP1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 H3F3CQ6NXT2 135 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 CSGALNACT2Q8N6G5 542 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 CHST4Q8NCG5 386 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 SPATA4Q8NEY3 305 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 OR8J1Q8NGP2 316 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 MTFP1Q9UDX5 166 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 ITGB4P16144 1822 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 KANK1Q14678 1352 aa1.56□□□□□ -2.16
RNU6-553P-201ENST00000364047 BICDL2A1A5D9 508 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 CHMP2AO43633 222 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 PLIN3O60664 434 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 FKBP6O75344 327 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 ASGR1P07306 291 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 U2AF2P26368 475 aaKnown RBP eCLIP1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 CHMLP26374 656 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 RBM34P42696 430 aaKnown RBP1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 GBX2P52951 348 aaPredicted RBP1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 CDH6P55285 790 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 DMC1Q14565 340 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 RBMY1FQ15415 496 aaKnown RBP1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 VPS26BQ4G0F5 336 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 SOHLH1Q5JUK2 328 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 UBE2UQ5VVX9 321 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 MED27Q6P2C8 311 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 SMARCD3Q6STE5 483 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 Q6ZSR3 168 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 LINC00336Q6ZUF6 198 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 NPWQ8N729 165 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 PRELID2Q8N945 189 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 HGDQ93099 445 aa1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 SAMHD1Q9Y3Z3 626 aaKnown RBP1.55□□□□□ -2.16
RNU6-553P-201ENST00000364047 FAM240BA0A1B0GVZ2 78 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms