RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 BEST4Q8NFU0 473 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 OR6N2Q8NGY6 317 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 OR1L3Q8NH93 324 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF519Q8TB69 540 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF431Q8TF32 576 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 GAL3ST4Q96RP7 486 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 AMELYQ99218 206 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 NDEL1Q9GZM8 345 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 WWTR1Q9GZV5 400 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 SLITRK2Q9H156 845 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 HEXA-AS1Q9H8Q6 139 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 MRPL15Q9P015 296 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 FBXL3Q9UKT7 428 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 IGHV1OR21-1A0A087WYE8 117 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ARPC4-TTLL3A0A0A6YYG9 625 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 G3V3Q6 166 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 CXCR1P25024 350 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 IL12BP29460 328 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 RPS27P42677 84 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 KIR3DL2P43630 455 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 SOX2P48431 317 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 NR0B1P51843 470 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 PNLIPRP2P54317 469 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 OR1D5P58170 312 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 NXPH1P58417 271 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 AP3S2P59780 193 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 HNRNPKP61978 463 aaKnown RBP eCLIP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 RASGEF1BQ0VAM2 473 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 SGCBQ16585 318 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 VWA2Q5GFL6 755 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 TEX30Q5JUR7 227 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 TMEM69Q5SWH9 247 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 SFRP4Q6FHJ7 346 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 LRRN1Q6UXK5 716 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 KRT77Q7Z794 578 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 OR51A4Q8NGJ6 313 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 OR10AC1Q8NH08 325 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 UTP23Q9BRU9 249 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 PCED1AQ9H1Q7 454 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 SLC6A15Q9H2J7 730 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ELF5Q9UKW6 265 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 B9D1Q9UPM9 204 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 FADS1O60427 444 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 PRAF2O60831 178 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 SDC3O75056 442 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 AFF3P51826 1226 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 FOXL2P58012 376 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 MRPL49Q13405 166 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 NSDHLQ15738 373 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 ADGRG3Q86Y34 549 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 DNAAF1Q8NEP3 725 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 C15orf40Q8WUR7 153 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 THEM6Q8WUY1 208 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 DAZLQ92904 295 aaKnown RBP6.52□□□□□ -1.37
CLCN3-202ENST00000360642 TMEM106AQ96A25 262 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 C4orf45Q96LM5 186 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 KCNG2Q9UJ96 466 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 IKZF2Q9UKS7 526 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 FLVCR2Q9UPI3 526 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 FKBP7Q9Y680 259 aa6.52□□□□□ -1.37
CLCN3-202ENST00000360642 A0A1B0GUH1 482 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 PRSS37A4D1T9 235 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 GLSO94925 669 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 IGHMP01871 453 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 TPOP07202 933 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 TMIGD3P0DMS9 266 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 PTHLHP12272 177 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 FOLR1P15328 257 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 PGCP20142 388 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 TAS2R20P59543 309 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 RPL27P61353 136 aaKnown RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 INSM1Q01101 510 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 PLCXD2Q0VAA5 305 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 PLA2G7Q13093 441 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 CBFBQ13951 182 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 WDR38Q5JTN6 314 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 HIST2H2BDQ6DRA6 164 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 TEX261Q6UWH6 196 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 GPR148Q8TDV2 347 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 GPR119Q8TDV5 335 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 NPIPB3Q92617 1050 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 OMA1Q96E52 524 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 SORCS2Q96PQ0 1159 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 OR8B4Q96RC9 309 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF436Q9C0F3 470 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 COMMD4Q9H0A8 199 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF552Q9H707 407 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF304Q9HCX3 659 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 MRPL22Q9NWU5 206 aaKnown RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 STEAP1Q9UHE8 339 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 SCP2D1Q9UJQ7 156 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ING1Q9UK53 422 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 U3KQ87 197 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 CACNA1CQ13936 2221 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 CPAMD8Q8IZJ3 1885 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 SEC16AO15027 2179 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 IGLV1-36A0A0B4J1U3 117 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 OR6C76A6NM76 312 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 F5H697 171 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms