RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 SLC22A12Q96S37 553 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 ADGRL4Q9HBW9 690 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 PXDNQ92626 1479 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 BCL3P20749 454 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 SOX18P35713 384 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 CDKN2DP55273 166 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 HOXC5Q00444 222 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 MANEALQ5VSG8 457 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 TRMT61AQ96FX7 289 aaKnown RBP7.39□□□□□ -1.23
SCN8A-201ENST00000354534 HBQ1P09105 142 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 ZNF841Q6ZN19 808 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 SLC16A12Q6ZSM3 486 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 NAXDQ8IW45 347 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 BEND2Q8NDZ0 799 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 ABHD4Q8TB40 342 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 ADAMTS16Q8TE57 1224 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 TBX15Q96SF7 602 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 SRD5A3Q9H8P0 318 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 DNASE2O00115 360 aaPredicted RBP7.39□□□□□ -1.23
SCN8A-201ENST00000354534 LEFTY1O75610 366 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 FABP2P12104 132 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 AOAHP28039 575 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 NOGQ13253 232 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 HIST3H3Q16695 136 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 TBC1D26Q86UD7 250 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 FAM3DQ96BQ1 224 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 LSM2Q9Y333 95 aaKnown RBP7.39□□□□□ -1.23
SCN8A-201ENST00000354534 PTRH2Q9Y3E5 179 aaKnown RBP7.39□□□□□ -1.23
SCN8A-201ENST00000354534 NFS1Q9Y697 457 aa7.39□□□□□ -1.23
SCN8A-201ENST00000354534 FAM208AQ9UK61 1670 aaKnown RBP7.39□□□□□ -1.23
SCN8A-201ENST00000354534 TRABD2BA6NFA1 517 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 TMEM221A6NGB7 291 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 C1QBP02746 253 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 SELEP16581 610 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 FECHP22830 423 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 KIR2DL3P43628 341 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PGGT1BP53609 377 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 NMNAT3Q96T66 252 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 LANCL2Q9NS86 450 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 APOBEC3BQ9UH17 382 aaKnown RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 TMEM265A0A087WTH1 108 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 ALOX5APP20292 161 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 TBC1D28Q2M2D7 210 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PLK5Q496M5 336 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 WBP2NLQ6ICG8 309 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 IGDCC3Q8IVU1 814 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 WDR76Q9H967 626 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 BCL9O00512 1426 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 OR4C45A6NMZ5 311 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 ADPRHP54922 357 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PSMG3Q9BT73 122 aaPredicted RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 GMPR2Q9P2T1 348 aaKnown RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 FOXE1O00358 373 aaPredicted RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 MPC1LP0DKB6 136 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 CALCBP10092 127 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 CSF2RBP32927 897 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PTGER1P34995 402 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 GPR17Q13304 367 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 Q6ZVL8 140 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 VN1R17PQ8TDU5 208 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PIGTQ969N2 578 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 IFT172Q9UG01 1749 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 F5P12259 2224 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 ZNF814B7Z6K7 855 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 C18orf21Q32NC0 220 aaPredicted RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 MIDNQ504T8 468 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 ADGRE4PQ86SQ3 457 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 MUC15Q8N387 334 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 MST1RQ04912 1400 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 MYO7AQ13402 2215 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 TMEM238LA0A1B0GVL6 79 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 A6NJY4 79 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 TNFRSF10CO14798 259 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PLRG1O43660 514 aaKnown RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 RBP4P02753 201 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 DDOSTP39656 456 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 LCTLQ6UWM7 567 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 DTWD1Q8N5C7 304 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 WDR92Q96MX6 357 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 ATP5SQ99766 215 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 DCAF13Q9NV06 445 aaKnown RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 SNHG28P0DPA3 235 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 LAIR1Q6GTX8 287 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 DOK3Q7L591 496 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 ZNF516Q92618 1163 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 KHSRPQ92945 711 aaKnown RBP eCLIP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 RAB7BQ96AH8 199 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 MRPS24Q96EL2 167 aaKnown RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 SLC46A1Q96NT5 459 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PARD6GQ9BYG4 376 aaPredicted RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 UBQLN3Q9H347 655 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.38□□□□□ -1.23
SCN8A-201ENST00000354534 NAT2P11245 290 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 CD99P14209 185 aa7.38□□□□□ -1.23
SCN8A-201ENST00000354534 CPEP16870 476 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms