RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 PAPOLBQ9NRJ5 636 aaKnown RBP16.08■□□□□ 0.16
VPS72-201ENST00000354473 COMMD3-BMI1R4GMX3 469 aa16.08■□□□□ 0.16
VPS72-201ENST00000354473 ABCA1O95477 2261 aa16.08■□□□□ 0.16
VPS72-201ENST00000354473 C17orf100A8MU93 164 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 LYNX1G3V0Z9 82 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 EBAG9O00559 213 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 NCR1O76036 304 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 HPXP02790 462 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 LYNX1P0DP58 116 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 PAICSP22234 425 aaKnown RBP16.07■□□□□ 0.16
VPS72-201ENST00000354473 FMO3P31513 532 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 RPS27P42677 84 aaKnown RBP16.07■□□□□ 0.16
VPS72-201ENST00000354473 NR4A2P43354 598 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 MAGEB1P43366 347 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 RIPPLY3P57055 190 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 GGTLC2Q14390 218 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 FAHD1Q6P587 224 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 ZNF786Q8N393 782 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 ZNF511Q8NB15 262 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 DNAJC9Q8WXX5 260 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 DCLRE1CQ96SD1 692 aaKnown RBP16.07■□□□□ 0.16
VPS72-201ENST00000354473 ATF6BQ99941 703 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 HCAR1Q9BXC0 346 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 WDR76Q9H967 626 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 STARD10Q9Y365 291 aa16.07■□□□□ 0.16
VPS72-201ENST00000354473 PLSCR5A0PG75 271 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 PSKH1P11801 424 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 FCGR1AP12314 374 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 USF1P22415 310 aaPredicted RBP16.06■□□□□ 0.16
VPS72-201ENST00000354473 TUBG1P23258 451 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 GIFP27352 417 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 RGS6P49758 472 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 ZNF81P51508 661 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 LOXL1Q08397 574 aaPredicted RBP16.06■□□□□ 0.16
VPS72-201ENST00000354473 ECH1Q13011 328 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 AMIGO2Q86SJ2 522 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 HIPK1Q86Z02 1210 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 MAP6Q96JE9 813 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 COG8Q96MW5 612 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 BPESC1Q9GZL8 116 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 PNRC2Q9NPJ4 139 aaKnown RBP16.06■□□□□ 0.16
VPS72-201ENST00000354473 TUBG2Q9NRH3 451 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 HIVEP2P31629 2446 aa16.06■□□□□ 0.16
VPS72-201ENST00000354473 G3V2T6 193 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 TIMM8AO60220 97 aaPredicted RBP16.05■□□□□ 0.16
VPS72-201ENST00000354473 HMGN1P05114 100 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 SPARCP09486 303 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 ZNF23P17027 643 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 ENTPD1P49961 510 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 DAPP51397 102 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 MMP15P51511 669 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 CCL8P80075 99 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 CDK5Q00535 292 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 RSPO1Q2MKA7 263 aaPredicted RBP16.05■□□□□ 0.16
VPS72-201ENST00000354473 PCGF3Q3KNV8 242 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 KRTAP27-1Q3LI81 207 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 TMEM236Q5W0B7 351 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 ZNF540Q8NDQ6 660 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 OR10S1Q8NGN2 331 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 LRTOMTQ8WZ04 291 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 APOBEC3DQ96AK3 386 aaPredicted RBP16.05■□□□□ 0.16
VPS72-201ENST00000354473 SLC25A19Q9HC21 320 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 NF1P21359 2839 aa16.05■□□□□ 0.16
VPS72-201ENST00000354473 YLPM1P49750 1951 aaKnown RBP16.05■□□□□ 0.16
VPS72-201ENST00000354473 ZSCAN5BA6NJL1 495 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PRR23D1E9PI22 279 aaPredicted RBP16.04■□□□□ 0.16
VPS72-201ENST00000354473 F5H5K5 113 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 J3QW42 95 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 SURF4O15260 269 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PRR23D2P0DMB1 279 aaPredicted RBP16.04■□□□□ 0.16
VPS72-201ENST00000354473 BLVRAP53004 296 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PSG7Q13046 419 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 KPNB1Q14974 876 aaKnown RBP16.04■□□□□ 0.16
VPS72-201ENST00000354473 TMEM249Q2WGJ8 235 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 LINC01590Q5TEZ4 76 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PLBD1Q6P4A8 553 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 DCXRQ7Z4W1 244 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 ZDHHC13Q8IUH4 622 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PARP8Q8N3A8 854 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 RDH5Q92781 318 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PTP4A1Q93096 173 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 CMBLQ96DG6 245 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PLEKHA8Q96JA3 519 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 TEX12Q9BXU0 123 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 KRT84Q9NSB2 600 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 NKIRAS2Q9NYR9 191 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 PTTG3PQ9NZH4 202 aa16.04■□□□□ 0.16
VPS72-201ENST00000354473 CGGBP1Q9UFW8 167 aaPredicted RBP16.04■□□□□ 0.16
VPS72-201ENST00000354473 FN1P02751 2386 aaKnown RBP16.03■□□□□ 0.16
VPS72-201ENST00000354473 IGHV4-61A0A0C4DH41 118 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 ZNF593O00488 134 aaPredicted RBP16.03■□□□□ 0.16
VPS72-201ENST00000354473 TPD52L2O43399 206 aaKnown RBP16.03■□□□□ 0.16
VPS72-201ENST00000354473 SPRY3O43610 288 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 IGHV1-46P01743 117 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 ACSM4P0C7M7 580 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 COL8A2P25067 703 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 CRISP1P54107 249 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 ACTR3P61158 418 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 RIN1Q13671 783 aa16.03■□□□□ 0.16
VPS72-201ENST00000354473 HLXQ14774 488 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms