RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GVQW1Q8N7I0 195 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ZNF676Q8N7Q3 588 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ADAMTS15Q8TE58 950 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 GRHL3Q8TE85 626 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 ASCL3Q9NQ33 180 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 GSKIPQ9P0R6 139 aa11.93□□□□□ -0.5
IFT88-202ENST00000351808 COL4A3Q01955 1670 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 ARID1BQ8NFD5 2236 aaPredicted RBP11.92□□□□□ -0.5
IFT88-202ENST00000351808 ELOA3DA6NLF2 546 aaPredicted RBP11.92□□□□□ -0.5
IFT88-202ENST00000351808 NDUFS4O43181 175 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 UPK3AO75631 287 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 CST4P01036 141 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 DPEP1P16444 411 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 MSX1P28360 303 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 CD52P31358 61 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 AFF3P51826 1226 aaKnown RBP11.92□□□□□ -0.5
IFT88-202ENST00000351808 SLC9A3R2Q15599 337 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 ELOA3BQ3SY89 546 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 TMCO2Q7Z6W1 182 aaPredicted RBP11.92□□□□□ -0.5
IFT88-202ENST00000351808 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 PLPP7Q8NBV4 271 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 ELOA3Q8NG57 546 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 TERB2Q8NHR7 220 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 MFSD8Q8NHS3 518 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 HPSE2Q8WWQ2 592 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 TMEM106CQ9BVX2 250 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 ZDHHC6Q9H6R6 413 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
IFT88-202ENST00000351808 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 SSR2P43308 183 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 ARRB1P49407 418 aaPredicted RBP11.92□□□□□ -0.5
IFT88-202ENST00000351808 TRA2AQ13595 282 aaKnown RBP eCLIP11.92□□□□□ -0.5
IFT88-202ENST00000351808 ZNF684Q5T5D7 378 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 LEG1Q6P5S2 330 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 CDS1Q92903 461 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 PLD4Q96BZ4 506 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 OR10C1Q96KK4 312 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 SNX22Q96L94 193 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 MRM2Q9UI43 246 aaKnown RBP11.92□□□□□ -0.5
IFT88-202ENST00000351808 KLHDC2Q9Y2U9 406 aa11.92□□□□□ -0.5
IFT88-202ENST00000351808 C1QTNF3-AMACRE9PGA6 284 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 RAB27BO00194 218 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 DVL1O14640 695 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 C1QL1O75973 258 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 LYL1P12980 280 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 CHATP28329 748 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 ZCCHC10Q8TBK6 192 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 MARCH1Q8TCQ1 289 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 CXorf40AQ8TE69 158 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 SLC41A2Q96JW4 573 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 STACQ99469 402 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 C6orf106Q9H6K1 298 aaPredicted RBP11.91□□□□□ -0.5
IFT88-202ENST00000351808 SPHK2Q9NRA0 654 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 TAC3Q9UHF0 121 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 SERTAD3Q9UJW9 196 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 TRBV5-7A0A0A0MS05 114 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 NPIPA5A0A0B4J1W7 369 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 NPIPA7E9PJI5 369 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 NFKBIEO00221 500 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 TAAR5O14804 337 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 LINC00614P0C842 121 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 NPIPA8P0DM63 369 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 LAMP2P13473 410 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 GNALP38405 381 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 NPY4RP50391 375 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 CEBPGP53567 150 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 TOMM20Q15388 145 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 RPUSD3Q6P087 351 aaKnown RBP11.91□□□□□ -0.5
IFT88-202ENST00000351808 POMZP3Q6PJE2 187 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 RSPO2Q6UXX9 243 aaPredicted RBP11.91□□□□□ -0.5
IFT88-202ENST00000351808 ZNF793Q6ZN11 406 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 MED25Q71SY5 747 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 FAM220AQ7Z4H9 259 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 SUMF2Q8NBJ7 301 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 RAB39BQ96DA2 213 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 PTCHD1Q96NR3 888 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 MACROD1Q9BQ69 325 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 SLCO5A1Q9H2Y9 848 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 MTHFD2LQ9H903 347 aaPredicted RBP11.91□□□□□ -0.5
IFT88-202ENST00000351808 CERS4Q9HA82 394 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 CLEC4EQ9ULY5 219 aa11.91□□□□□ -0.5
IFT88-202ENST00000351808 SLC17A2O00624 439 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 SYT7O43581 403 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 TLX1P31314 330 aaPredicted RBP11.9□□□□□ -0.5
IFT88-202ENST00000351808 PMPCAQ10713 525 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 FHL1Q13642 323 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 HNF4GQ14541 408 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 FAM46CQ5VWP2 391 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
IFT88-202ENST00000351808 VITQ6UXI7 678 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 ZNF101Q8IZC7 436 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 COMMD1Q8N668 190 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
IFT88-202ENST00000351808 NKD1Q969G9 470 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 ADAD1Q96M93 576 aaKnown RBP11.9□□□□□ -0.5
IFT88-202ENST00000351808 RARRES2Q99969 163 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 FBXL17Q9UF56 701 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 IKZF2Q9UKS7 526 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 MTCL1Q9Y4B5 1905 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms