RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 MPZP25189 248 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 MAS1LP35410 378 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 FHITP49789 147 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 NDUFA6P56556 154 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 ZNF260Q3ZCT1 412 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 ACTBL2Q562R1 376 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TRAPPC6BQ86SZ2 158 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 PNLDC1Q8NA58 520 aaKnown RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 RELTQ969Z4 430 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TGIF2Q9GZN2 237 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 SLCO5A1Q9H2Y9 848 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 LMAN1LQ9HAT1 526 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TRPM6Q9BX84 2022 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 SOX1O00570 391 aaPredicted RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 RAB6AP20340 208 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 THBS4P35443 961 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 SNCAP37840 140 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 CX3CR1P49238 355 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 MFGE8Q08431 387 aaPredicted RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 BEND4Q6ZU67 534 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 ZNF550Q7Z398 422 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TCEAL8Q8IYN2 117 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 SMARCD2Q92925 531 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 CPNE4Q96A23 557 aaPredicted RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 CMKLR1Q99788 373 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 RGCCQ9H4X1 137 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 DUSP22Q9NRW4 184 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 IGKV1D-42A0A075B6H8 117 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TBC1D3DA0A087WVF3 549 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TBC1D3IA0A087WXS9 549 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 GRXCR1A8MXD5 290 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TBC1D3LB9A6J9 549 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 RAB27BO00194 218 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 EIF1AYO14602 144 aaKnown RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 SOD3P08294 240 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 PI3P19957 117 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 DDTP30046 118 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 RAB28P51157 221 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 SUPT4H1P63272 117 aaKnown RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 SLC9A3R2Q15599 337 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 ANKRD55Q3KP44 614 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 TBC1D3CQ6IPX1 549 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 FAHD2BQ6P2I3 314 aaPredicted RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 TBC1D3Q8IZP1 549 aaPredicted RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 CSNK1A1LQ8N752 337 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 LRRC75AQ8NAA5 344 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 RCBTB1Q8NDN9 531 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 OR4D6Q8NGJ1 314 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 IRF7Q92985 503 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 FAHD2AQ96GK7 314 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 SOX7Q9BT81 388 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 PARPBPQ9NWS1 579 aa12.78□□□□□ -0.36
RLIM-202ENST00000349225 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 GDF2Q9UK05 429 aaPredicted RBP12.78□□□□□ -0.36
RLIM-202ENST00000349225 LMX1BO60663 402 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 SFTPBP07988 381 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.36
RLIM-202ENST00000349225 PDZD11Q5EBL8 140 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 SLC35D2Q76EJ3 337 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 ASB5Q8WWX0 329 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 MR1Q95460 341 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 GNRHR2Q96P88 292 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 C5orf66Q9H5L9 145 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 ZNF107Q9UII5 783 aaPredicted RBP12.77□□□□□ -0.36
RLIM-202ENST00000349225 COLEC10Q9Y6Z7 277 aa12.77□□□□□ -0.36
RLIM-202ENST00000349225 A0A087WV62 115 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 ZNF432O94892 652 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 TBC1D3HP0C7X1 549 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 HKR1P10072 659 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 IGFBP3P17936 291 aaPredicted RBP12.77□□□□□ -0.37
RLIM-202ENST00000349225 SPCS3P61009 180 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 IL15RAQ13261 267 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 AWAT2Q6E213 333 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 STX12Q86Y82 276 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 C19orf47Q8N9M1 422 aaKnown RBP12.77□□□□□ -0.37
RLIM-202ENST00000349225 CA5BP1Q8WTZ4 195 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 RAB7BQ96AH8 199 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 HCFC2Q9Y5Z7 792 aa12.77□□□□□ -0.37
RLIM-202ENST00000349225 ZNF860A6NHJ4 632 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 NME2P1O60361 137 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 SLC35G4P0C7Q5 338 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 MGAT2Q10469 447 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 DEFB134Q4QY38 66 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 MIDNQ504T8 468 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 MESTQ5EB52 335 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 MDGA2Q7Z553 956 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 S100PBPQ96BU1 408 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 TMEM68Q96MH6 324 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 ZNF587Q96SQ5 575 aaPredicted RBP12.76□□□□□ -0.37
RLIM-202ENST00000349225 GFOD1Q9NXC2 390 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 SLC25A1P53007 311 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 SQSTM1Q13501 440 aa12.76□□□□□ -0.37
RLIM-202ENST00000349225 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
RLIM-202ENST00000349225 ULK3Q6PHR2 472 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms