RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 KRTAP27-1Q3LI81 207 aa23.58■■□□□ 1.37
SSBP4-202ENST00000348495 TIMM23BQ5SRD1 257 aa23.58■■□□□ 1.37
SSBP4-202ENST00000348495 MDP1Q86V88 176 aa23.58■■□□□ 1.37
SSBP4-202ENST00000348495 COQ7Q99807 217 aa23.58■■□□□ 1.37
SSBP4-202ENST00000348495 ISYNA1Q9NPH2 558 aa23.58■■□□□ 1.37
SSBP4-202ENST00000348495 ATPIF1Q9UII2 106 aa23.58■■□□□ 1.37
SSBP4-202ENST00000348495 FBXL3Q9UKT7 428 aa23.58■■□□□ 1.37
SSBP4-202ENST00000348495 A0A1W2PR80 420 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 FAM90A27PA6NNH2 459 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 C16orf97H3BN30 126 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 SRSF10O75494 262 aaKnown RBP23.57■■□□□ 1.36
SSBP4-202ENST00000348495 AGAP20933 346 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 CRYGSP22914 178 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 HOXC12P31275 282 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 OTX1P32242 354 aaPredicted RBP23.57■■□□□ 1.36
SSBP4-202ENST00000348495 RPL5P46777 297 aaKnown RBP23.57■■□□□ 1.36
SSBP4-202ENST00000348495 BDH1Q02338 343 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 ECH1Q13011 328 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 TIGD6Q17RP2 521 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 C1QTNF12Q5T7M4 302 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 ZNF584Q8IVC4 421 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 CA5BP1Q8WTZ4 195 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 OPALINQ96PE5 141 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 ACTR6Q9GZN1 396 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 OR10A4Q9H209 315 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 AMDHD2Q9Y303 409 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 SLC25A15Q9Y619 301 aa23.57■■□□□ 1.36
SSBP4-202ENST00000348495 GTF2A1P52655 376 aaPredicted RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 GRB2P62993 217 aaKnown RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 MLLT11Q13015 90 aaPredicted RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 ALDH16A1Q8IZ83 802 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 HAVCR2Q8TDQ0 301 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 USB1Q9BQ65 265 aaKnown RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 NIPAL2Q9H841 368 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 TRIM36Q9NQ86 728 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 GRIP1Q9Y3R0 1128 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 COX5BP10606 129 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 PSMB9P28065 219 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 PSMB10P40306 273 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 MRPL28Q13084 256 aaKnown RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 ITLN2Q8WWU7 325 aaPredicted RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 KCNJ15Q99712 375 aa23.56■■□□□ 1.36
SSBP4-202ENST00000348495 SIRT4Q9Y6E7 314 aaPredicted RBP23.56■■□□□ 1.36
SSBP4-202ENST00000348495 NKX2-6A6NCS4 301 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 ZG16O60844 167 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 RPP14O95059 124 aaKnown RBP23.55■■□□□ 1.36
SSBP4-202ENST00000348495 HSMCR30P0CW71 290 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 TGM4P49221 684 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 GBX2P52951 348 aaPredicted RBP23.55■■□□□ 1.36
SSBP4-202ENST00000348495 TAF13Q15543 124 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 ARMCX4Q5H9R4 360 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 FDX2Q6P4F2 183 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 HSD17B8Q92506 261 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 ST6GALNAC2Q9UJ37 374 aa23.55■■□□□ 1.36
SSBP4-202ENST00000348495 CBR1P16152 277 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 ZNF14P17017 642 aaPredicted RBP23.54■■□□□ 1.36
SSBP4-202ENST00000348495 HTR5AP47898 357 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 RAB39AQ14964 217 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 CCDC58Q4VC31 144 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 XKRXQ6PP77 449 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 FAM169BQ8N8A8 192 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 RPS4Y2Q8TD47 263 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 SLC7A6Q92536 515 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 RNASE6Q93091 150 aaKnown RBP23.54■■□□□ 1.36
SSBP4-202ENST00000348495 TMIGD2Q96BF3 282 aa23.54■■□□□ 1.36
SSBP4-202ENST00000348495 PNPP00491 289 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 IGKV3-15P01624 115 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 SERPINA5P05154 406 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 MMP16P51512 607 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 TAS2R43P59537 309 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 NANOS3P60323 173 aaKnown RBP23.53■■□□□ 1.36
SSBP4-202ENST00000348495 PSMA6P60900 246 aaKnown RBP23.53■■□□□ 1.36
SSBP4-202ENST00000348495 TPBGQ13641 420 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 TAB1Q15750 504 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 C22orf34Q6ZV56 151 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 KCNJ16Q9NPI9 418 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 CRNNQ9UBG3 495 aaPredicted RBP23.53■■□□□ 1.36
SSBP4-202ENST00000348495 R4GMQ9 66 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 OGG1O15527 345 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 DBHP09172 617 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 APEX1P27695 318 aaKnown RBP23.53■■□□□ 1.36
SSBP4-202ENST00000348495 HSD11B1P28845 292 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 PLP2Q04941 152 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 TFF3Q07654 80 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 MFGE8Q08431 387 aaPredicted RBP23.53■■□□□ 1.36
SSBP4-202ENST00000348495 RPL22L1Q6P5R6 122 aaKnown RBP23.53■■□□□ 1.36
SSBP4-202ENST00000348495 ZNF808Q8N4W9 903 aaPredicted RBP23.53■■□□□ 1.36
SSBP4-202ENST00000348495 ZFP41Q8N8Y5 198 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 OR13F1Q8NGS4 319 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 FAM206AQ9NX38 181 aa23.53■■□□□ 1.36
SSBP4-202ENST00000348495 LOC100509620A0A075B734 347 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 AGFG2O95081 481 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 CPEP16870 476 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 STOMP27105 288 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 LIPAP38571 399 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 PRKXP51817 358 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 GALK2Q01415 458 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 DMKNQ6E0U4 476 aaPredicted RBP23.52■■□□□ 1.36
SSBP4-202ENST00000348495 SEZ6L2Q6UXD5 910 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms