RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 FGF9P31371 208 aaPredicted RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 OR2B6P58173 313 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 RAC3P60763 192 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 VBP1P61758 197 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 MRPL28Q13084 256 aaKnown RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 TRAM1Q15629 374 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 TAB1Q15750 504 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 CCDC58Q4VC31 144 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 PDSS1Q5T2R2 415 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 ZNF684Q5T5D7 378 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 C11orf71Q6IPW1 123 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 DNM1P34Q6PK57 102 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 TFAP2EQ6VUC0 442 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 B3GLCTQ6Y288 498 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 BEND4Q6ZU67 534 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 VASH1Q7L8A9 365 aaPredicted RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 UEVLDQ8IX04 471 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 SLC35F2Q8IXU6 374 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 TIGD4Q8IY51 512 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 ATP6V1C2Q8NEY4 427 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 OR6X1Q8NH79 312 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 OR10D3Q8NH80 312 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 SPRYD4Q8WW59 207 aaPredicted RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 ZNRF4Q8WWF5 429 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 RPL3LQ92901 407 aaKnown RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 S100PBPQ96BU1 408 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 ZHX1-C8orf76Q96EF9 292 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 ADAD1Q96M93 576 aaKnown RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 NAA11Q9BSU3 229 aaPredicted RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 SF3B5Q9BWJ5 86 aaKnown RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 MRPL13Q9BYD1 178 aaKnown RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 NUAK2Q9H093 628 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 OR51E2Q9H255 320 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 SYT4Q9H2B2 425 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 SRA1Q9HD15 236 aaKnown RBP8.48□□□□□ -1.05
MRPL55-204ENST00000348259 TRIM36Q9NQ86 728 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 EMC9Q9Y3B6 208 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 TGP01266 2768 aa8.48□□□□□ -1.05
MRPL55-204ENST00000348259 ARPC4-TTLL3A0A0A6YYG9 625 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 TRDV1A0A1B0GX56 115 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 DPRXA6NFQ7 191 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 SHISA9B4DS77 424 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 DCTN6O00399 190 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 OGG1O15527 345 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 PLPP2O43688 288 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 GPX5O75715 221 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 SULT1C4O75897 302 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 CLPXO76031 633 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 NR2C1P13056 603 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 HLA-DOBP13765 273 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 IFNGR1P15260 489 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 PAX7P23759 505 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 SHC1P29353 583 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 SERPINB10P48595 397 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 RPS3AP61247 264 aaKnown RBP8.47□□□□□ -1.05
MRPL55-204ENST00000348259 NCS1P62166 190 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 HIST3H3Q16695 136 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 PCK2Q16822 640 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 DGUOKQ16854 277 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 TEX30Q5JUR7 227 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 THEM4Q5T1C6 240 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 LIPKQ5VXJ0 399 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 TMEM225Q6GV28 225 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 PLEKHG7Q6ZR37 379 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 ESPNLQ6ZVH7 1005 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 STEAP2Q8NFT2 490 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 OR6K6Q8NGW6 343 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 ROBO4Q8WZ75 1007 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 SLC25A44Q96H78 314 aaPredicted RBP8.47□□□□□ -1.05
MRPL55-204ENST00000348259 KLHL15Q96M94 604 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 DCUN1D5Q9BTE7 237 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 ESRP2Q9H6T0 727 aaKnown RBP8.47□□□□□ -1.05
MRPL55-204ENST00000348259 WDR76Q9H967 626 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 ISG20L2Q9H9L3 353 aaKnown RBP8.47□□□□□ -1.05
MRPL55-204ENST00000348259 GLRX2Q9NS18 164 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 PAQR5Q9NXK6 330 aaPredicted RBP8.47□□□□□ -1.05
MRPL55-204ENST00000348259 CCDC59Q9P031 241 aaKnown RBP8.47□□□□□ -1.05
MRPL55-204ENST00000348259 KLHL9Q9P2J3 617 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 SSR3Q9UNL2 185 aa8.47□□□□□ -1.05
MRPL55-204ENST00000348259 DYSFO75923 2080 aa8.46□□□□□ -1.05
MRPL55-204ENST00000348259 A0A0J9YW62 118 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 A0A1W2PNR3 127 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 ZNF670-ZNF695F2Z2N8 137 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 TRAF3IP2O43734 574 aaPredicted RBP8.46□□□□□ -1.06
MRPL55-204ENST00000348259 SLC16A7O60669 478 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 LALBAP00709 142 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 PLGP00747 810 aaPredicted RBP8.46□□□□□ -1.06
MRPL55-204ENST00000348259 HLA-DPB1P04440 258 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 CD3EP07766 207 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 MRPL3P09001 348 aaKnown RBP8.46□□□□□ -1.06
MRPL55-204ENST00000348259 TACSTD2P09758 323 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 ZNF43P17038 809 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 ALOX5APP20292 161 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 NR4A1P22736 598 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 PYCR1P32322 319 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 SFTPDP35247 375 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 TGM4P49221 684 aa8.46□□□□□ -1.06
MRPL55-204ENST00000348259 ZNF133P52736 654 aaPredicted RBP8.46□□□□□ -1.06
MRPL55-204ENST00000348259 POU3F1Q03052 451 aaPredicted RBP8.46□□□□□ -1.06
MRPL55-204ENST00000348259 GLO1Q04760 184 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms