RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 MPTX1A8MV57 137 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RAB27BO00194 218 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RAD51DO75771 328 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RLN2P04090 185 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ITGB2P05107 769 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 GNB3P16520 340 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 NFYAP23511 347 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 NTF4P34130 210 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 NUBP1P53384 320 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SLC26A5P58743 744 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SORDQ00796 357 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ATPAF1Q5TC12 328 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 METTL11BQ5VVY1 283 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 CARD17Q5XLA6 110 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 RGS7BPQ6MZT1 257 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SPICQ8N5J4 248 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 OR2AK2Q8NG84 335 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 SUN5Q8TC36 379 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 PNPLA2Q96AD5 504 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF775Q96BV0 537 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF837Q96EG3 531 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 OR6C1Q96RD1 312 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 C7orf50Q9BRJ6 194 aaKnown RBP5.37□□□□□ -1.55
CLCN3-201ENST00000347613 CENPMQ9NSP4 180 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 OCIAD1Q9NX40 245 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 STMN3Q9NZ72 180 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 MMACHCQ9Y4U1 282 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 LHFPL6Q9Y693 200 aa5.37□□□□□ -1.55
CLCN3-201ENST00000347613 LOC100289279A0A1B0GTE1 492 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1B0GTQ1 180 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1B0GX78 115 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 A0A1W2PPL8 197 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 K7ESF4 209 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 XKRYO14609 159 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 SULT1B1O43704 296 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR2J2O76002 312 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 IGHMP01871 453 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 CPN1P15169 458 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PPP3CBP16298 524 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 CFPP27918 469 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 HTR2CP28335 458 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 BIDP55957 195 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PMPCAQ10713 525 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 TDGQ13569 410 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 GK2Q14410 553 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PCK2Q16822 640 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 RSPO1Q2MKA7 263 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 CLLU1Q5K131 121 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF660Q6AZW8 331 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 STEAP1BQ6NZ63 245 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PLXDC2Q6UX71 529 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 Q7L0L9 218 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 GRINAQ7Z429 371 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 TMED4Q7Z7H5 227 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF227Q86WZ6 799 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 WDSUB1Q8N9V3 476 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 BOLLQ8N9W6 283 aaKnown RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 COQ8AQ8NI60 647 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 WNT2BQ93097 391 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 C1orf147Q96MC9 270 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 MRPL13Q9BYD1 178 aaKnown RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 COMMD4Q9H0A8 199 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 EVA1AQ9H8M9 152 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR52A1Q9UKL2 312 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 DHDHQ9UQ10 334 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 SVEP1Q4LDE5 3571 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 BDP1A6H8Y1 2624 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 IGHV3-15A0A0B4J1V0 119 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 TMEM269A0A1B0GVZ9 245 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR2AT4A6NND4 320 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 G3V3Y1 287 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 M0R233 179 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 RER1O15258 196 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 NUDT21O43809 227 aaKnown RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 SLC25A12O75746 678 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ECDO95905 644 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 VSIG8P0DPA2 414 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PGCP20142 388 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 AVPR2P30518 371 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 MYBPHQ13203 477 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ZMYND11Q15326 602 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 RAB11BQ15907 218 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PLAC9Q5JTB6 97 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF385CQ66K41 422 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 SLC18B1Q6NT16 456 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 IDO2Q6ZQW0 420 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 TMUB2Q71RG4 321 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 RHOUQ7L0Q8 258 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 JAGN1Q8N5M9 183 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 MEIOBQ8N635 442 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR13C3Q8NGS6 347 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 OR6N1Q8NGY5 312 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ANGPTL6Q8NI99 470 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 TTC9Q92623 222 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 LIN37Q96GY3 246 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 GAREM1Q9H706 876 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 PNRC2Q9NPJ4 139 aaKnown RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 SLC2A4RGQ9NR83 387 aa5.36□□□□□ -1.55
CLCN3-201ENST00000347613 ZNF275Q9NSD4 429 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-201ENST00000347613 MRPL39Q9NYK5 338 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms