RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 OR2A7Q96R45 310 aa11.45□□□□□ -0.58
CLK3-201ENST00000345005 MNTQ99583 582 aa11.45□□□□□ -0.58
CLK3-201ENST00000345005 SLITRK2Q9H156 845 aa11.45□□□□□ -0.58
CLK3-201ENST00000345005 SCPEP1Q9HB40 452 aa11.45□□□□□ -0.58
CLK3-201ENST00000345005 TAS2R8Q9NYW2 309 aa11.45□□□□□ -0.58
CLK3-201ENST00000345005 ZMIZ1Q9ULJ6 1067 aa11.45□□□□□ -0.58
CLK3-201ENST00000345005 NPIPA1Q9UND3 350 aa11.45□□□□□ -0.58
CLK3-201ENST00000345005 PTPRZ1P23471 2315 aaPredicted RBP11.45□□□□□ -0.58
CLK3-201ENST00000345005 A0A1W2PNV4 684 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 PLSCR5A0PG75 271 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 UBE2QL1A1L167 161 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 CDRT15L2A8MXV6 281 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 G3V3Y1 287 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 ACOT7O00154 380 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 DCTN6O00399 190 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 ZIC3O60481 467 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 B3GALNT1O75752 331 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 AKR7A3O95154 331 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 NAT2P11245 290 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SNRPBP14678 240 aaKnown RBP11.44□□□□□ -0.58
CLK3-201ENST00000345005 FOSL1P15407 271 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 ZNF17P17021 662 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 CASRP41180 1078 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 HSF1Q00613 529 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 OC90Q02509 493 aaPredicted RBP11.44□□□□□ -0.58
CLK3-201ENST00000345005 TMEM176BQ3YBM2 270 aaPredicted RBP11.44□□□□□ -0.58
CLK3-201ENST00000345005 SLC35D2Q76EJ3 337 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 LINGO2Q7L985 606 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SSX6Q7RTT6 188 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 DTX1Q86Y01 620 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 KDM8Q8N371 416 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 ASB10Q8WXI3 467 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 ANKRD10Q9NXR5 420 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 B9D1Q9UPM9 204 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 RPH3AQ9Y2J0 694 aaPredicted RBP11.44□□□□□ -0.58
CLK3-201ENST00000345005 SLC22A23A1A5C7 686 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 DVL2O14641 736 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 KHDRBS3O75525 346 aaKnown RBP11.44□□□□□ -0.58
CLK3-201ENST00000345005 CEACAM1P13688 526 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 ZNF250P15622 560 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SRMP19623 302 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 CNR1P21554 472 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 ITGA3P26006 1051 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 CRABP1P29762 137 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SRD5A2P31213 254 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SFTPDP35247 375 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 NUP62P37198 522 aaPredicted RBP11.44□□□□□ -0.58
CLK3-201ENST00000345005 PSMA6P60900 246 aaKnown RBP11.44□□□□□ -0.58
CLK3-201ENST00000345005 SLC35A1P78382 337 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SCRN3Q0VDG4 424 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 TSC22D1Q15714 1073 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 TP53I3Q53FA7 332 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 CLVS2Q5SYC1 327 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 FAM27D1Q5T7N8 215 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 LRRN1Q6UXK5 716 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 OVCH2Q7RTZ1 564 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 CMTM4Q8IZR5 234 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 OR5T2Q8NGG2 359 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SCARB1Q8WTV0 552 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 THRSPQ92748 146 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 SFXN2Q96NB2 322 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 PIGQQ9BRB3 760 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 TMEM185BQ9H7F4 350 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 NOX3Q9HBY0 568 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 MGAT4CQ9UBM8 478 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 CYB5R1Q9UHQ9 305 aa11.44□□□□□ -0.58
CLK3-201ENST00000345005 MED12Q93074 2177 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 TRBV2A0A0J9YWF9 115 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 A0A1W2PNR3 127 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 ANKRD20A5PA0PJZ0 165 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 MFSD2BA6NFX1 497 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 SULT2B1O00204 365 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 SLC16A7O60669 478 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 ZNF432O94892 652 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 PMS2P2O95744 297 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 OPN1LWP04000 364 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 TACSTD2P09758 323 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 HLA-DOBP13765 273 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 RAB3AP20336 220 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 SSTR2P30874 369 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 DNASE1L1P49184 302 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 ZP1P60852 638 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 POU3F1Q03052 451 aaPredicted RBP11.43□□□□□ -0.58
CLK3-201ENST00000345005 MELKQ14680 651 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 MPPED2Q15777 294 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 ZNF239Q16600 458 aaKnown RBP11.43□□□□□ -0.58
CLK3-201ENST00000345005 RAET1LQ5VY80 246 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 IGF2-ASQ6U949 168 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 TMPPEQ6ZT21 453 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 ZNF227Q86WZ6 799 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 CDC20BQ86Y33 519 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 EIF4E3Q8N5X7 224 aaKnown RBP11.43□□□□□ -0.58
CLK3-201ENST00000345005 CLEC1AQ8NC01 280 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 MIB2Q96AX9 1013 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 ADAD1Q96M93 576 aaKnown RBP11.43□□□□□ -0.58
CLK3-201ENST00000345005 KLHL15Q96M94 604 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 INTS14Q96SY0 518 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 WDR76Q9H967 626 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 SDHAF2Q9NX18 166 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms