RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ACBD4Q8NC06 268 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 OR4D6Q8NGJ1 314 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 ST7LQ8TDW4 575 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 SLC6A7Q99884 636 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 FBXO4Q9UKT5 387 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 ASXL3Q9C0F0 2248 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 OR6C76A6NM76 312 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 CD8AP01732 235 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 CSN2P05814 226 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 MGMTP16455 207 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 ATF4P18848 351 aaPredicted RBP13.73□□□□□ -0.21
BRCC3-201ENST00000330045 C14orf28Q4W4Y0 310 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 PAPD4Q6PIY7 484 aaKnown RBP13.73□□□□□ -0.21
BRCC3-201ENST00000330045 OR5M8Q8NGP6 311 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 OR13C8Q8NGS7 320 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 NKD1Q969G9 470 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 FOXRED1Q96CU9 486 aaPredicted RBP13.73□□□□□ -0.21
BRCC3-201ENST00000330045 VN1R1Q9GZP7 353 aa13.73□□□□□ -0.21
BRCC3-201ENST00000330045 GDF2Q9UK05 429 aaPredicted RBP13.73□□□□□ -0.21
BRCC3-201ENST00000330045 A0A1B0GTI1 187 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 OR5H14A6NHG9 310 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 DISC1C4P0D8 188 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 D6RAR5 112 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 NPIPA5E9PKD4 350 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 HPP00738 406 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 MYF5P13349 255 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 CD34P28906 385 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 PCK2Q16822 640 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 C1orf189Q5VU69 101 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 C17orf107Q6ZR85 190 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 LYPD6Q86Y78 171 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.72□□□□□ -0.21
BRCC3-201ENST00000330045 EIF4E3Q8N5X7 224 aaKnown RBP13.72□□□□□ -0.21
BRCC3-201ENST00000330045 ZBTB44Q8NCP5 570 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 OR4S1Q8NGB4 309 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 ASB10Q8WXI3 467 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 TMEM234Q8WY98 164 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 ST8SIA4Q92187 359 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 NPIPA1Q9UND3 350 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 NOP16Q9Y3C1 178 aaKnown RBP13.72□□□□□ -0.21
BRCC3-201ENST00000330045 A0A0D9SG52 128 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 METTL21EPA6NDL7 271 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 LMO7DNF2Z398 122 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 P2RY10O00398 339 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 CDK2AP1O14519 115 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 UBBP0CG47 229 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 UBCP0CG48 685 aaKnown RBP13.72□□□□□ -0.21
BRCC3-201ENST00000330045 RAB6AP20340 208 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 OR1D5P58170 312 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 RPS27AP62979 156 aaKnown RBP13.72□□□□□ -0.21
BRCC3-201ENST00000330045 UBA52P62987 128 aaKnown RBP13.72□□□□□ -0.21
BRCC3-201ENST00000330045 MEF2DQ14814 521 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 LIN54Q6MZP7 749 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 LPCAT3Q6P1A2 487 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 OGFOD3Q6PK18 319 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 CORO6Q6QEF8 472 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 DEGS2Q6QHC5 323 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 CD163Q86VB7 1156 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 SLC25A32Q9H2D1 315 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 CHRDQ9H2X0 955 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 CENPMQ9NSP4 180 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 GPN3Q9UHW5 284 aaPredicted RBP13.72□□□□□ -0.21
BRCC3-201ENST00000330045 GPR160Q9UJ42 338 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 RAB22AQ9UL26 194 aa13.72□□□□□ -0.21
BRCC3-201ENST00000330045 LOC101059948A0A1B0GTJ6 334 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 K7ESF4 209 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 SMAD9O15198 467 aaKnown RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 HLA-AP01891 365 aaKnown RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 H2BFMP0C1H6 154 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 NAGAP17050 411 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 DAP3P51398 398 aaKnown RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 CAPZA1P52907 286 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 ZP4Q12836 540 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 OR7A5Q15622 319 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 NKPD1Q17RQ9 610 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 RAB12Q6IQ22 244 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 LANCL3Q6ZV70 420 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 STPG2Q8N412 459 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 RELL2Q8NC24 303 aaPredicted RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 ST8SIA2Q92186 375 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 AQP3Q92482 292 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 ARL5BQ96KC2 179 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 NPAS1Q99742 590 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 PDCD10Q9BUL8 212 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 CNTD2Q9H8S5 307 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 GLS2Q9UI32 602 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 RHBDD3Q9Y3P4 386 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 ARID1BQ8NFD5 2236 aaPredicted RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 IGKV1D-43A0A0B4J1Z2 117 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 TMEM200CA6NKL6 621 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 ADAM10O14672 748 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 FOLR1P15328 257 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 CXADRP78310 365 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 SRSF4Q08170 494 aaKnown RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 ZNF260Q3ZCT1 412 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 CDNFQ49AH0 187 aa13.71□□□□□ -0.21
BRCC3-201ENST00000330045 RNASE10Q5GAN6 216 aaKnown RBP13.71□□□□□ -0.21
BRCC3-201ENST00000330045 PHF19Q5T6S3 580 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms