RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 NOX3Q9HBY0 568 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 CENPMQ9NSP4 180 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 BABAM2Q9NXR7 383 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 GNG8Q9UK08 70 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 IKZF2Q9UKS7 526 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 LRP12Q9Y561 859 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 SLC25A15Q9Y619 301 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
PRPF18-201ENST00000320054 MAGEB4O15481 346 aaPredicted RBP11.85□□□□□ -0.51
PRPF18-201ENST00000320054 ZG16O60844 167 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 CLDN14O95500 239 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 APOC1P02654 83 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 CBR1P16152 277 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 CRYGSP22914 178 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 CCKARP32238 428 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 OTX1P32242 354 aaPredicted RBP11.85□□□□□ -0.51
PRPF18-201ENST00000320054 NR1H2P55055 460 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 TUBA1BP68363 451 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 SORDQ00796 357 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 BDH1Q02338 343 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 PLP2Q04941 152 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 MED22Q15528 200 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 TAF13Q15543 124 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 KRTAP27-1Q3LI81 207 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 C3orf36Q3SXR2 165 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 LIPNQ5VXI9 398 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 FDX2Q6P4F2 183 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 TUBA1AQ71U36 451 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.85□□□□□ -0.51
PRPF18-201ENST00000320054 YIPF7Q8N8F6 280 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 AKR7LQ8NHP1 331 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 GATAD2BQ8WXI9 593 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 RORBQ92753 470 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 COG8Q96MW5 612 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 OR5M11Q96RB7 305 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 KCNJ15Q99712 375 aa11.85□□□□□ -0.51
PRPF18-201ENST00000320054 CRNNQ9UBG3 495 aaPredicted RBP11.85□□□□□ -0.51
PRPF18-201ENST00000320054 IQCMA0A1B0GVH7 501 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 NKX2-6A6NCS4 301 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 PSMD9O00233 223 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 SERPINA5P05154 406 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 TFAP2AP05549 437 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 LCKP06239 509 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF14P17017 642 aaPredicted RBP11.84□□□□□ -0.51
PRPF18-201ENST00000320054 HTR5AP47898 357 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 TGM4P49221 684 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 GBX2P52951 348 aaPredicted RBP11.84□□□□□ -0.51
PRPF18-201ENST00000320054 TAS2R43P59537 309 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 CDSNQ15517 529 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
PRPF18-201ENST00000320054 CCDC58Q4VC31 144 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 SYT6Q5T7P8 510 aaPredicted RBP11.84□□□□□ -0.51
PRPF18-201ENST00000320054 SPATC1Q76KD6 591 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 CPEB3Q8NE35 698 aaKnown RBP11.84□□□□□ -0.51
PRPF18-201ENST00000320054 MUL1Q969V5 352 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 SPTSSAQ969W0 71 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 RNF166Q96A37 237 aaPredicted RBP11.84□□□□□ -0.51
PRPF18-201ENST00000320054 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 MGLLQ99685 303 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 TRIM36Q9NQ86 728 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
PRPF18-201ENST00000320054 RALYQ9UKM9 306 aaKnown RBP11.84□□□□□ -0.51
PRPF18-201ENST00000320054 USP9XQ93008 2570 aaPredicted RBP11.83□□□□□ -0.52
PRPF18-201ENST00000320054 DOPEY1Q5JWR5 2465 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 ACOD1A6NK06 481 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 SRSF10O75494 262 aaKnown RBP11.83□□□□□ -0.52
PRPF18-201ENST00000320054 LALBAP00709 142 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 IGLV1-44P01699 117 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 HSD11B1P28845 292 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 ALDH3B2P48448 385 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 MMP16P51512 607 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
PRPF18-201ENST00000320054 TFF3Q07654 80 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 MLLT11Q13015 90 aaPredicted RBP11.83□□□□□ -0.52
PRPF18-201ENST00000320054 DOC2BQ14184 412 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 RAB39AQ14964 217 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 PPA1Q15181 289 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 TAB1Q15750 504 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 NEDD8Q15843 81 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 ZNF829Q3KNS6 432 aaPredicted RBP11.83□□□□□ -0.52
PRPF18-201ENST00000320054 RPL22L1Q6P5R6 122 aaKnown RBP11.83□□□□□ -0.52
PRPF18-201ENST00000320054 DRAM2Q6UX65 266 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 KLBQ86Z14 1044 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 ZNF584Q8IVC4 421 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 RPS4Y2Q8TD47 263 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 DCLRE1CQ96SD1 692 aaKnown RBP11.83□□□□□ -0.52
PRPF18-201ENST00000320054 R4GMQ9 66 aa11.83□□□□□ -0.52
PRPF18-201ENST00000320054 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
PRPF18-201ENST00000320054 LOC100509620A0A075B734 347 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 A0A1W2PR80 420 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 WIPF3A6NGB9 483 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 E9PI62 339 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 OGG1O15527 345 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 INMTO95050 263 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 AGFG2O95081 481 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 CD1AP06126 327 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
PRPF18-201ENST00000320054 STOMP27105 288 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms