RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 HIST2H3AQ71DI3 136 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 C1orf174Q8IYL3 243 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 ADGRG5Q8IZF4 528 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 LINC00471Q8N535 108 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 POP5Q969H6 163 aaKnown RBP13.86□□□□□ -0.19
LSM1-201ENST00000311351 MDFIQ99750 246 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 ARMC1Q9NVT9 282 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 MRPL22Q9NWU5 206 aaKnown RBP13.86□□□□□ -0.19
LSM1-201ENST00000311351 TREM2Q9NZC2 230 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 ATPIF1Q9UII2 106 aa13.86□□□□□ -0.19
LSM1-201ENST00000311351 FAM157AC9JC47 383 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 HLA-DQA2P01906 255 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 RAP2AP10114 183 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 TMEM33P57088 247 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 MVKQ03426 396 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 COX10Q12887 443 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 MICAQ29983 383 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 CR1LQ2VPA4 569 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 FAM209AQ5JX71 171 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 LINC01356Q8N9X3 169 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 GJC3Q8NFK1 279 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 OR9Q1Q8NGQ5 310 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 OR4Q3Q8NH05 313 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 ZNRF4Q8WWF5 429 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 C1orf159Q96HA4 380 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 DDOQ99489 341 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 COQ7Q99807 217 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 TSSK6Q9BXA6 273 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 HDHD2Q9H0R4 259 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 LPAR2Q9HBW0 351 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 IL20Q9NYY1 176 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 PTTG3PQ9NZH4 202 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 LPAR3Q9UBY5 353 aa13.85□□□□□ -0.19
LSM1-201ENST00000311351 PURGQ9UJV8 347 aaKnown RBP13.85□□□□□ -0.19
LSM1-201ENST00000311351 GGT2P36268 569 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 RBMXP38159 391 aaKnown RBP13.84□□□□□ -0.19
LSM1-201ENST00000311351 RPS27P42677 84 aaKnown RBP13.84□□□□□ -0.19
LSM1-201ENST00000311351 Q6ZR03 302 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 SLC37A3Q8NCC5 494 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 PROKR2Q8NFJ6 384 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 OR10G2Q8NGC3 310 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 OR51L1Q8NGJ5 315 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 CANT1Q8WVQ1 401 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 CMBLQ96DG6 245 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 ELMOD3Q96FG2 381 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 NIPSNAP1Q9BPW8 284 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 CHID1Q9BWS9 393 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 DGCR6LQ9BY27 220 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 CYSLTR2Q9NS75 346 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 CGGBP1Q9UFW8 167 aaPredicted RBP13.84□□□□□ -0.19
LSM1-201ENST00000311351 KLHL21Q9UJP4 597 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 DYSFO75923 2080 aa13.84□□□□□ -0.19
LSM1-201ENST00000311351 DHRS12A0PJE2 317 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 TVP23AA6NH52 213 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 CLDN25C9JDP6 229 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 GYG2O15488 501 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 CST1P01037 141 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 ADH4P08319 380 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 PSKH1P11801 424 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 KITLGP21583 273 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 TRAP1Q12931 704 aaKnown RBP13.83□□□□□ -0.2
LSM1-201ENST00000311351 CRMP1Q14194 572 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 HLXQ14774 488 aaPredicted RBP13.83□□□□□ -0.2
LSM1-201ENST00000311351 SLC36A3Q495N2 470 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 ZMAT1Q5H9K5 638 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 ZNF362Q5T0B9 420 aaPredicted RBP13.83□□□□□ -0.2
LSM1-201ENST00000311351 OR5AS1Q8N127 324 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 LNX2Q8N448 690 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 CCL17Q92583 94 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 SLC7A6OSQ96CW6 309 aaPredicted RBP13.83□□□□□ -0.2
LSM1-201ENST00000311351 DCLRE1CQ96SD1 692 aaKnown RBP13.83□□□□□ -0.2
LSM1-201ENST00000311351 PITX2Q99697 317 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 WDR76Q9H967 626 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 PNRC2Q9NPJ4 139 aaKnown RBP13.83□□□□□ -0.2
LSM1-201ENST00000311351 DCAF16Q9NXF7 216 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 CYB5R1Q9UHQ9 305 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 WIPI2Q9Y4P8 454 aa13.83□□□□□ -0.2
LSM1-201ENST00000311351 AQP12BA6NM10 295 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 IFNA2P01563 188 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 GYPBP06028 91 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 CD55P08174 381 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 SRD5A1P18405 259 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 LIPAP38571 399 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 RGS6P49758 472 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 PRSS12P56730 875 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 LMO4P61968 165 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 TNFAIP6P98066 277 aaPredicted RBP13.82□□□□□ -0.2
LSM1-201ENST00000311351 CDK5R2Q13319 367 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 FLOT2Q14254 428 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 RSPO1Q2MKA7 263 aaPredicted RBP13.82□□□□□ -0.2
LSM1-201ENST00000311351 HFEQ30201 348 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 ZNF771Q7L3S4 317 aaPredicted RBP13.82□□□□□ -0.2
LSM1-201ENST00000311351 TMEM179BQ7Z7N9 219 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 AQP12AQ8IXF9 295 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 IQCF1Q8N6M8 205 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 OR2T33Q8NG76 320 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 OR10S1Q8NGN2 331 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 OR2AJ1Q8NGZ0 328 aa13.82□□□□□ -0.2
LSM1-201ENST00000311351 GIPC3Q8TF64 312 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms