RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 COMMD4Q9H0A8 199 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 NPIPA1Q9UND3 350 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 GPR37O15354 613 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 CREBL2O60519 120 aaPredicted RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 CCL4P13236 92 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 ADRA2CP18825 462 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 KLK2P20151 261 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 PSMB1P20618 241 aaKnown RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 P2RX1P51575 399 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 SPOCK1Q08629 439 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 FGL1Q08830 312 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 GK2Q14410 553 aaPredicted RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 NHLRC3Q5JS37 347 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 SYS1Q8N2H4 156 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 FAM71CQ8NEG0 241 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 NMNAT2Q9BZQ4 307 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 MFFQ9GZY8 342 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 PPP4R1LQ9P1A2 415 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 WNT16Q9UBV4 365 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 IGKV1D-43A0A0B4J1Z2 117 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 PQLC2LA1A4F0 135 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 PRSS37A4D1T9 235 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 BLACEA4D250 179 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 ABCD4O14678 606 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 LMX1BO60663 402 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 CDK2P24941 298 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 POLR2HP52434 150 aaKnown RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 MFGE8Q08431 387 aaPredicted RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 TRAM1Q15629 374 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 LINC00303Q3SY05 128 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 RGS7BPQ6MZT1 257 aaPredicted RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 ANKRD37Q7Z713 158 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 JAGN1Q8N5M9 183 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 LRRC75AQ8NAA5 344 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 APCDD1LQ8NCL9 501 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 BVESQ8NE79 360 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 DVL3Q92997 716 aaPredicted RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 MR1Q95460 341 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 SPACA5Q96QH8 159 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF471Q9BX82 626 aaPredicted RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 NKX6-2Q9C056 277 aaPredicted RBP9.06□□□□□ -0.96
FOXN4-201ENST00000299162 MBD2Q9UBB5 411 aa9.06□□□□□ -0.96
FOXN4-201ENST00000299162 IGHV5-10-1A0A0J9YXX1 117 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 LOC101059948A0A1B0GTJ6 334 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 TMEM200CA6NKL6 621 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 C10orf142B7Z368 130 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 UPK3AO75631 287 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 SC5DO75845 299 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 IGHV2-70P01814 119 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 BGLAPP02818 100 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 EDN3P14138 238 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF28P17035 718 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 NDUFB7P17568 137 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 CDAP32320 146 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 GNALP38405 381 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 SLC6A8P48029 635 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 PRKXP51817 358 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 EFNB2P52799 333 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 EPHA4P54764 986 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 STARD6P59095 220 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 RPL27P61353 136 aaKnown RBP9.05□□□□□ -0.96
FOXN4-201ENST00000299162 RSPO4Q2I0M5 234 aaPredicted RBP9.05□□□□□ -0.96
FOXN4-201ENST00000299162 Q499Y3 187 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 TCEAL6Q6IPX3 200 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 TMEM71Q6P5X7 295 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 PPP1R3BQ86XI6 285 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 PRSS35Q8N3Z0 413 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 HAVCR2Q8TDQ0 301 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 GTF3AQ92664 365 aaKnown RBP9.05□□□□□ -0.96
FOXN4-201ENST00000299162 TCEAL3Q969E4 200 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 FAM46BQ96A09 425 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 SLC25A28Q96A46 364 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 MVB12AQ96EY5 273 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 NECAB3Q96P71 396 aaPredicted RBP9.05□□□□□ -0.96
FOXN4-201ENST00000299162 OR5B2Q96R09 309 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 PDCD10Q9BUL8 212 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 PTDSS2Q9BVG9 487 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 JAM3Q9BX67 310 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 OR5V1Q9UGF6 321 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 UBE2QL1A1L167 161 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 A8MVM7 634 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 MCRIP1C9JLW8 97 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 D6RAR5 112 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF823P16415 610 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 ALOX5APP20292 161 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 DCDP81605 110 aaKnown RBP9.05□□□□□ -0.96
FOXN4-201ENST00000299162 IKZF1Q13422 519 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 C2orf68Q2NKX9 166 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 NUP54Q7Z3B4 507 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 BPIFCQ8NFQ6 507 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 OR11G2Q8NGC1 345 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 DEFB126Q9BYW3 111 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 ADAM19Q9H013 955 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 UCK1Q9HA47 277 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 ASF1BQ9NVP2 202 aa9.05□□□□□ -0.96
FOXN4-201ENST00000299162 IGHV3-15A0A0B4J1V0 119 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 RIDAP52758 137 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms