RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 PQLC1Q8N2U9 271 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 CMBLQ96DG6 245 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 ELMOD3Q96FG2 381 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 WACQ9BTA9 647 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 TMPRSS13Q9BYE2 586 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 RERGLQ9H628 205 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 ELOVL3Q9HB03 270 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 TBCCD1Q9NVR7 557 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 MAGEL2Q9UJ55 1249 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 METRNQ9UJH8 293 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 PURGQ9UJV8 347 aaKnown RBP8.07□□□□□ -1.12
HMHB1-201ENST00000289448 NDRG4Q9ULP0 352 aaKnown RBP8.07□□□□□ -1.12
HMHB1-201ENST00000289448 SAMD4AQ9UPU9 718 aaKnown RBP8.07□□□□□ -1.12
HMHB1-201ENST00000289448 GRIP1Q9Y3R0 1128 aa8.07□□□□□ -1.12
HMHB1-201ENST00000289448 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 LOC105371242A0A075B767 164 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 IGLV1-36A0A0B4J1U3 117 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 TRAV20A0A0B4J274 112 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 H3BNX3 289 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 ARPC2O15144 300 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 GMNNO75496 209 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
HMHB1-201ENST00000289448 PPP1R3DO95685 299 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 ATP6V1B2P21281 511 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 KITLGP21583 273 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 ZFP36P26651 326 aaKnown RBP8.06□□□□□ -1.12
HMHB1-201ENST00000289448 LIPAP38571 399 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 LSM6P62312 80 aaKnown RBP8.06□□□□□ -1.12
HMHB1-201ENST00000289448 TNFAIP6P98066 277 aaPredicted RBP8.06□□□□□ -1.12
HMHB1-201ENST00000289448 AQP6Q13520 282 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 HLXQ14774 488 aaPredicted RBP8.06□□□□□ -1.12
HMHB1-201ENST00000289448 KCNMB1Q16558 191 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 MEP1BQ16820 701 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 LIPNQ5VXI9 398 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 C1orf94Q6P1W5 598 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 CORO6Q6QEF8 472 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 SMARCD3Q6STE5 483 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 ADCK1Q86TW2 530 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 OR6V1Q8N148 313 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 SEMA6DQ8NFY4 1073 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 OR1F12Q8NHA8 337 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 RAB1CQ92928 201 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 POP5Q969H6 163 aaKnown RBP8.06□□□□□ -1.12
HMHB1-201ENST00000289448 HAVCR1Q96D42 359 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 PYURFQ96I23 114 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 EGLN1Q9GZT9 426 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 VCX3BQ9H321 246 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 OCEL1Q9H607 264 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 CYSLTR2Q9NS75 346 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 PLEK2Q9NYT0 353 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 ZDHHC8Q9ULC8 765 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 AURKCQ9UQB9 309 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 LHFPL6Q9Y693 200 aa8.06□□□□□ -1.12
HMHB1-201ENST00000289448 CASQ2O14958 399 aaPredicted RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 GADD45GO95257 159 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 PNPP00491 289 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 IGHV2-70P01814 119 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 HIST1H1CP16403 213 aaKnown RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 ADRA2CP18825 462 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 GSTM3P21266 225 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 RPS6KA3P51812 740 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 HIST1H3AP68431 136 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 LCN2P80188 198 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 SPIBQ01892 262 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 RFX4Q33E94 735 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 HIST2H3PS2Q5TEC6 136 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 ARL9Q6T311 187 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 CYP2R1Q6VVX0 501 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 HIST2H3AQ71DI3 136 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 ZNF283Q8N7M2 679 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 NPEPL1Q8NDH3 523 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 OR2Z1Q8NG97 314 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 FANK1Q8TC84 345 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 RAB39BQ96DA2 213 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 TIMD4Q96H15 378 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 SAMD8Q96LT4 415 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 ERMAPQ96PL5 475 aaPredicted RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 DCLRE1CQ96SD1 692 aaKnown RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 DIRC2Q96SL1 478 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 NMNAT3Q96T66 252 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 GAL3ST1Q99999 423 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 NDEL1Q9GZM8 345 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 TMEM106BQ9NUM4 274 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 CGGBP1Q9UFW8 167 aaPredicted RBP8.05□□□□□ -1.12
HMHB1-201ENST00000289448 OPN4Q9UHM6 478 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 B9D1Q9UPM9 204 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 AP4S1Q9Y587 144 aa8.05□□□□□ -1.12
HMHB1-201ENST00000289448 DHRS12A0PJE2 317 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 ISPDA4D126 451 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 OR6C68A6NDL8 312 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 ARPC3O15145 178 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 SBK2P0C263 348 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 HOXB6P17509 224 aaKnown RBP8.04□□□□□ -1.12
HMHB1-201ENST00000289448 EPHA1P21709 976 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 TUBG1P23258 451 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 FPR3P25089 353 aa8.04□□□□□ -1.12
HMHB1-201ENST00000289448 RRM2P31350 389 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms