RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DAP3P51398 398 aaKnown RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 B3GALT5-AS1P59052 145 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 OR2B8PP59922 312 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 DHODHQ02127 395 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 STX4Q12846 297 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 RBM39Q14498 530 aaKnown RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 INPP5JQ15735 1006 aaPredicted RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 UBE2V2Q15819 145 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 MIDNQ504T8 468 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 CYBRD1Q53TN4 286 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 PAPPA-AS1Q5QFB9 102 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 SYPL2Q5VXT5 272 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 C11orf87Q6NUJ2 197 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 LCLAT1Q6UWP7 414 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ZNF836Q6ZNA1 936 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 APTXQ7Z2E3 356 aaKnown RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 CMTM1Q8IZ96 169 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 KIF2BQ8N4N8 673 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 CATSPER1Q8NEC5 780 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 TSTD1Q8NFU3 115 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 OR4F17Q8NGA8 305 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 OR4K2Q8NGD2 314 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 OR4F5Q8NH21 305 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 OR52N5Q8NH56 324 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 LMO3Q8TAP4 145 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 PTH2Q96A98 100 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ZBED6CLQ96FA7 236 aaPredicted RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 SERPINB12Q96P63 405 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 NEDD4LQ96PU5 975 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 OR4F4Q96R69 305 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 IL12RB2Q99665 862 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 WDR77Q9BQA1 342 aaPredicted RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 TRIM51Q9BSJ1 452 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ULBP1Q9BZM6 244 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ING2Q9H160 280 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 METTL9Q9H1A3 318 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ARMC7Q9H6L4 198 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 NHEJ1Q9H9Q4 299 aaPredicted RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 NMUR1Q9HB89 426 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 BEX1Q9HBH7 125 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 RETNQ9HD89 108 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 NRN1Q9NPD7 142 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ASCL3Q9NQ33 180 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ABCC13Q9NSE7 274 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 EXD2Q9NVH0 621 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 PAK1IP1Q9NWT1 392 aaPredicted RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 OPN4Q9UHM6 478 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 RWDD2AQ9UIY3 292 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ERVW-1Q9UQF0 538 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 RCL1Q9Y2P8 373 aaKnown RBP3.89□□□□□ -1.79
CD44-202ENST00000278385 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 CSNK1G3Q9Y6M4 447 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 ZNF318Q5VUA4 2279 aa3.89□□□□□ -1.79
CD44-202ENST00000278385 DOCK8Q8NF50 2099 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 VSTM2BA6NLU5 285 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 NEDD8-MDP1E9PL57 170 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 G3V3Y1 287 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 H0Y980 276 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 ACOX3O15254 700 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 SLC31A1O15431 190 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 MAGEB4O15481 346 aaPredicted RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 ATP8B1O43520 1251 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 UGT2B17O75795 530 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 KLF8O95600 359 aaPredicted RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 TCRBP04435 133 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 TFAP2AP05549 437 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 TACSTD2P09758 323 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 CISD3P0C7P0 127 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 ZNF806P0C7X5 589 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 BCKDHAP12694 445 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 GM2AP17900 193 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 FOXN2P32314 431 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 ARR3P36575 388 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 RANBP1P43487 201 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 IDH2P48735 452 aaKnown RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 FUT6P51993 359 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 XGP55808 180 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 DLX5P56178 289 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 CLDN6P56747 220 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 OR1D5P58170 312 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 ZP1P60852 638 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 POU3F1Q03052 451 aaPredicted RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 RIPPLY1Q0D2K3 151 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 MFAP5Q13361 173 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 TWIST1Q15672 202 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 LPAL2Q16609 132 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 GTDC1Q4AE62 458 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 METTL21CQ5VZV1 264 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 C3orf33Q6P1S2 294 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 EMBQ6PCB8 327 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 DNM1P34Q6PK57 102 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 ATRAIDQ6UW56 229 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 FAM71AQ8IYT1 594 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 CLIP4Q8N3C7 705 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 STPG2Q8N412 459 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 KIR3DL3Q8N743 410 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 C15orf54Q8N8G6 183 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms