RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MCEMP1Q8IX19 187 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 LRRC18Q8N456 261 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 ASB5Q8WWX0 329 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 TMEM106AQ96A25 262 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 SARAFQ96BY9 339 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 KCNJ15Q99712 375 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 PBOV1Q9GZY1 135 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 HHLA2Q9UM44 414 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 FREM1Q5H8C1 2179 aa14.38□□□□□ -0.11
TPM1-201ENST00000267996 CACNA1GO43497 2377 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 TMEM127O75204 238 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 HSD11B1P28845 292 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 OTX1P32242 354 aaPredicted RBP14.37□□□□□ -0.11
TPM1-201ENST00000267996 TAF13Q15543 124 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 RSPO1Q2MKA7 263 aaPredicted RBP14.37□□□□□ -0.11
TPM1-201ENST00000267996 ELFN2Q5R3F8 820 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 STAC2Q6ZMT1 411 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 ZNF627Q7L945 461 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 PRSS45Q7RTY3 260 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 NUFIP2Q7Z417 695 aaKnown RBP14.37□□□□□ -0.11
TPM1-201ENST00000267996 SLC22A24Q8N4F4 322 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 APH1AQ96BI3 265 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 WACQ9BTA9 647 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 COMMD3Q9UBI1 195 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 AK6Q9Y3D8 172 aaKnown RBP14.37□□□□□ -0.11
TPM1-201ENST00000267996 V9GYH0 126 aa14.37□□□□□ -0.11
TPM1-201ENST00000267996 LOC107986453A0A1B0GWG9 222 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 RRP8O43159 456 aaKnown RBP14.36□□□□□ -0.11
TPM1-201ENST00000267996 ACSM4P0C7M7 580 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 AGTR1P30556 359 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 PRKXP51817 358 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 TBR1Q16650 682 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 TSEN15Q8WW01 171 aaKnown RBP14.36□□□□□ -0.11
TPM1-201ENST00000267996 SH3GL3Q99963 347 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 SOSTQ9BQB4 213 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 SLITRK2Q9H156 845 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 SLC25A18Q9H1K4 315 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 TCF7L1Q9HCS4 588 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 GLRX2Q9NS18 164 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 DAPK2Q9UIK4 370 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 LHX6Q9UPM6 363 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 DHDHQ9UQ10 334 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 ANKRD11Q6UB99 2663 aaPredicted RBP14.36□□□□□ -0.11
TPM1-201ENST00000267996 SPTBN4Q9H254 2564 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 TRAV8-7A0A075B6U6 113 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 OR14I1A6ND48 311 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 SS18L1O75177 396 aaPredicted RBP14.36□□□□□ -0.11
TPM1-201ENST00000267996 KRT33AO76009 404 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 B4GALT1P15291 398 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 ADRA2CP18825 462 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 ATF1P18846 271 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 CX3CR1P49238 355 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 ZNF121P58317 390 aaPredicted RBP14.36□□□□□ -0.11
TPM1-201ENST00000267996 IFITM3Q01628 133 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 SCRN3Q0VDG4 424 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 RAB35Q15286 201 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 PLEKHN1Q494U1 663 aaPredicted RBP14.36□□□□□ -0.11
TPM1-201ENST00000267996 ASPHD2Q6ICH7 369 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 GMPPAQ96IJ6 420 aaPredicted RBP14.36□□□□□ -0.11
TPM1-201ENST00000267996 ABRACLQ9P1F3 81 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 SLC5A6Q9Y289 635 aa14.36□□□□□ -0.11
TPM1-201ENST00000267996 MED12LQ86YW9 2145 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 A0A1B0GTI1 187 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 TTLL8A6PVC2 850 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 ZNF587BE7ETH6 402 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 P2RY10O00398 339 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 HPGDSO60760 199 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 IGHV3-9P01782 118 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 SLC2A2P11168 524 aaPredicted RBP14.35□□□□□ -0.11
TPM1-201ENST00000267996 FSTP19883 344 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 EVX1P49640 407 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 PCBD1P61457 104 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 ECH1Q13011 328 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 GUSBP1Q15486 140 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 KRTAP27-1Q3LI81 207 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 SKA3Q8IX90 412 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 OR8B12Q8NGG6 310 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 SDHCQ99643 169 aaPredicted RBP14.35□□□□□ -0.11
TPM1-201ENST00000267996 HDHD2Q9H0R4 259 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 BRD7Q9NPI1 651 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 FOXJ3Q9UPW0 622 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 V9GY05 133 aa14.35□□□□□ -0.11
TPM1-201ENST00000267996 PIEZO1Q92508 2521 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 MGAQ8IWI9 3026 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 OR6C6A6NF89 314 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 IFITM5A6NNB3 132 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 H3BSH0 61 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 AIPO00170 330 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 SGCEO43556 437 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 SYNGR3O43761 229 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 SLC19A2O60779 497 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 UPK1BO75841 260 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 CD2P06729 351 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 CD37P11049 281 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 ZNF32P17041 273 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 IGFBP3P17936 291 aaPredicted RBP14.34□□□□□ -0.11
TPM1-201ENST00000267996 CRYGSP22914 178 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 CFPP27918 469 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 PSMD7P51665 324 aa14.34□□□□□ -0.11
TPM1-201ENST00000267996 ARF1P84077 181 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms