RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MOB1AQ9H8S9 216 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 NOX4Q9NPH5 578 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 CACNA1AO00555 2505 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 A0A075B6Q4 140 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 ARPC4-TTLL3A0A0A6YYG9 625 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 A0A1W2PPK0 400 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 MED19A0JLT2 244 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 MBD3L4A6NDZ8 208 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 MBD3L3A6NE82 208 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 MBD3L5A6NJ08 208 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 ACOD1A6NK06 481 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 WDR1O75083 606 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 FARS2O95363 451 aaKnown RBP20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 ISG15P05161 165 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 INHBBP09529 407 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 ZNF32P17041 273 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 PTGER4P35408 488 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 MAGEB1P43366 347 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 PCBD1P61457 104 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 RAB35Q15286 201 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 TFAP2EQ6VUC0 442 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 SLC16A14Q7RTX9 510 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 TPRA1Q86W33 373 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 OR51A4Q8NGJ6 313 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 MBD3L2Q8NHZ7 208 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 FGFBP3Q8TAT2 258 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 PLEK2Q9NYT0 353 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 PLEKHB1Q9UF11 243 aaPredicted RBP20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 BSNQ9UPA5 3926 aa20.06■□□□□ 0.8
SMARCB1-201ENST00000263121 FREM1Q5H8C1 2179 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 BOD1L1Q8NFC6 3051 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 SMIM30A4D0T7 59 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 OCM2P0CE71 109 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 MAPK3P27361 379 aaPredicted RBP20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 OTX1P32242 354 aaPredicted RBP20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 PRKXP51817 358 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 MOGQ16653 247 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 HSD17B12Q53GQ0 312 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 C9orf135Q5VTT2 229 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 RTL6Q6ICC9 239 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 ZNF704Q6ZNC4 412 aaPredicted RBP20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 SEM1Q6ZVN7 128 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 ELMOD2Q8IZ81 293 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 FAM57AQ8TBR7 257 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 SLX1AQ9BQ83 275 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 PBOV1Q9GZY1 135 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 HDHD2Q9H0R4 259 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 NUFIP1Q9UHK0 495 aaKnown RBP20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 TIMM10BQ9Y5J6 103 aa20.05■□□□□ 0.8
SMARCB1-201ENST00000263121 ATMQ13315 3056 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 TRBV5-7A0A0A0MS05 114 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 IQCMA0A1B0GVH7 501 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 SGCEO43556 437 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 SYNGR3O43761 229 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 TTRP02766 147 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 TPOP07202 933 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 MMP7P09237 267 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 UBCP0CG48 685 aaKnown RBP20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 MPGP29372 298 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 KIR2DL2P43627 348 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 CX3CR1P49238 355 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 CAV3P56539 151 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 ZNF121P58317 390 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 RSPO1Q2MKA7 263 aaPredicted RBP20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 NR2C2APQ86WQ0 139 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 THRSPQ92748 146 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 ZNF224Q9NZL3 707 aa20.04■□□□□ 0.8
SMARCB1-201ENST00000263121 FIGNL2A6NMB9 653 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 PATE4P0C8F1 98 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 ACHEP22303 614 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 SOX2P48431 317 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 BMXP51813 675 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 CD163Q86VB7 1156 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 OR6K3Q8NGY3 331 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 ZFAND2BQ8WV99 257 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 KCNS3Q9BQ31 491 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 OR2H1Q9GZK4 316 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 C6orf62Q9GZU0 229 aaPredicted RBP20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 BRD7Q9NPI1 651 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 FAM215AQ9Y5M1 114 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 NCOR2Q9Y618 2525 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 DOCK7Q96N67 2140 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 OR6C6A6NF89 314 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 DOK2O60496 412 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 NCR1O76036 304 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 IL18BPO95998 194 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 RAF1P04049 648 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 ITGA5P08648 1049 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 CRYGSP22914 178 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 PSG4Q00888 419 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 ECH1Q13011 328 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 C1orf185Q5T7R7 199 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 TMEM244Q5VVB8 128 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 ZNF774Q6NX45 483 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 PRSS45Q7RTY3 260 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 ZNF283Q8N7M2 679 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 ORAI1Q96D31 301 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 SNRNP40Q96DI7 357 aaKnown RBP20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 WNT5BQ9H1J7 359 aa20.03■□□□□ 0.8
SMARCB1-201ENST00000263121 PRORYQ9H606 182 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms