RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 OR1Q1Q15612 314 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 MPPED2Q15777 294 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 RPL13AP3Q6NVV1 102 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 NHLRC1Q6VVB1 395 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 ZNF440Q8IYI8 595 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 LNX2Q8N448 690 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 C15orf54Q8N8G6 183 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 SLC7A13Q8TCU3 470 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 SLC41A3Q96GZ6 507 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 C17orf51A8MQB3 221 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 AGTR1P30556 359 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 POU3F4P49335 361 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 TMEM44Q2T9K0 475 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 GDF7Q7Z4P5 450 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 KLBQ86Z14 1044 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 TMEM156Q8N614 296 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 RFKQ969G6 155 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 LURAP1Q96LR2 239 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 ADAT1Q9BUB4 502 aaKnown RBP16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 ABRACLQ9P1F3 81 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 CBY1Q9Y3M2 126 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 NKX2-8O15522 239 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 LBHQ53QV2 105 aaPredicted RBP16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 SMARCD3Q6STE5 483 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 CLEC1AQ8NC01 280 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 LAT2Q9GZY6 243 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 RYDENQ9NUL5 291 aaKnown RBP16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 SLC7A7Q9UM01 511 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 PCDHB10Q9UN67 800 aa16.94■□□□□ 0.3
COL4A3BP-201ENST00000261415 CFAP47Q6ZTR5 3102 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 C9orf170A2RU37 121 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 ZNF879B4DU55 563 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 HCRTR2O43614 444 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 ZNF44P15621 663 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 ITGA3P26006 1051 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 CCR4P51679 360 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 ART1P52961 327 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 PPIAP62937 165 aaKnown RBP16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 CXADRP78310 365 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 TRAM1Q15629 374 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 DND1Q8IYX4 353 aaKnown RBP16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 LINC00471Q8N535 108 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 SPRYD4Q8WW59 207 aaPredicted RBP16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 TRIM2Q9C040 744 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 TMEM27Q9HBJ8 222 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 KLRF1Q9NZS2 232 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 RCE1Q9Y256 329 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 CHCHD2Q9Y6H1 151 aaPredicted RBP16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 CEP295Q9C0D2 2601 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 TP53I11O14683 189 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 IFNGP01579 166 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 CD53P19397 219 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 SHC1P29353 583 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 ACSM5Q6NUN0 579 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 PODNL1Q6PEZ8 512 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 SSX3Q99909 188 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 GINS4Q9BRT9 223 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 METTL7AQ9H8H3 244 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 SMCO4Q9NRQ5 59 aa16.93■□□□□ 0.3
COL4A3BP-201ENST00000261415 LOC400499M0QZD8 3231 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 A0A0B4J2E0 115 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 A0A1B0GX12 115 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 KDM4EB2RXH2 506 aaPredicted RBP16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 NPBWR1P48145 328 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 ALKBH1Q13686 389 aaKnown RBP16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 ZNF468Q5VIY5 522 aaPredicted RBP16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 POMGNT2Q8NAT1 580 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 OR4F15Q8NGB8 312 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 DUSP19Q8WTR2 217 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 WDR89Q96FK6 387 aaPredicted RBP16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 C14orf144Q96I85 54 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 CMTM3Q96MX0 182 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 CNTNAP3BQ96NU0 1288 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 ICAM5Q9UMF0 924 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 MSRB2Q9Y3D2 182 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 FREM3P0C091 2139 aa16.92■□□□□ 0.3
COL4A3BP-201ENST00000261415 A0A1B0GWA3 101 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 KANTRA0A1W2PQU2 76 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 RFPL4AA6NLU0 287 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 RFPL4AL1F8VTS6 287 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 AGAP20933 346 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 PTGDSP41222 190 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 CXXC5Q7LFL8 322 aaKnown RBP16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 KCNE4Q8WWG9 221 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 KLHDC3Q9BQ90 382 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 GGACTQ9BVM4 153 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 TLNRD1Q9H1K6 362 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 CHMP1AQ9HD42 196 aaPredicted RBP16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 ASH2LQ9UBL3 628 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 FRYQ5TBA9 3013 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 C2orf72A6NCS6 295 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 GMFGO60234 142 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 LYPD3O95274 346 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 NTN1O95631 604 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 SLC6A8P48029 635 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 H2BFSP57053 126 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 C17orf67Q0P5P2 114 aa16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 ZNF322Q6U7Q0 402 aaPredicted RBP16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 DMRTC2Q8IXT2 367 aaPredicted RBP16.91■□□□□ 0.3
COL4A3BP-201ENST00000261415 BEST3Q8N1M1 668 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms