RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PPP1R3AQ16821 1122 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 CCDC14Q49A88 953 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 TFDP3Q5H9I0 405 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 RNLSQ5VYX0 342 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 FAHD2BQ6P2I3 314 aaPredicted RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 XKRXQ6PP77 449 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 BAIAP2L2Q6UXY1 529 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 NCCRP1Q6ZVX7 275 aaPredicted RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 NLRP9Q7RTR0 991 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 PRSS48Q7RTY5 328 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 UMODL1-AS1Q8N2C9 162 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 BBOF1Q8ND07 529 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 CATSPER1Q8NEC5 780 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 JOSD2Q8TAC2 188 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 C1orf54Q8WWF1 131 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 RPL3LQ92901 407 aaKnown RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 HAUS1Q96CS2 278 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 ZBED6CLQ96FA7 236 aaPredicted RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 FAHD2AQ96GK7 314 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 COQ2Q96H96 371 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF514Q96K75 400 aaPredicted RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 C12orf66Q96MD2 445 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 AMDHD1Q96NU7 426 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 IP6K3Q96PC2 410 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 MCCC1Q96RQ3 725 aaPredicted RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 FOXC2Q99958 501 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 CNPY3Q9BT09 278 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 NXF5Q9H1B4 397 aaKnown RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 CENPHQ9H3R5 247 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 SLC40A1Q9NP59 571 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 UFSP2Q9NUQ7 469 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 PTBP2Q9UKA9 531 aaKnown RBP3.57□□□□□ -1.84
TRA2B-201ENST00000259043 PPIL1Q9Y3C6 166 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 OARD1Q9Y530 152 aa3.57□□□□□ -1.84
TRA2B-201ENST00000259043 CHD3Q12873 2000 aaKnown RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 A0A1W2PQ72 361 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 OR5K4A6NMS3 321 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 OR52A4PA6NMU1 304 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 C9J4A7 227 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 H7C0C1 242 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 CST8O60676 142 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 SH3BGRLO75368 114 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 KLK3P07288 261 aaPredicted RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 MIPP30301 263 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PCK1P35558 622 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 ACVR1BP36896 505 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 HPCAL1P37235 193 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 HSPA9P38646 679 aaKnown RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 BDKRB1P46663 353 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 ATP5OP48047 213 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PLTPP55058 493 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 RPL23AP62750 156 aaKnown RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 CSNK1G2P78368 415 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 OGDHQ02218 1023 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 CAV1Q03135 178 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 BCL2L1Q07817 233 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 NCF4Q15080 339 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PDK2Q15119 407 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 TRIP13Q15645 432 aaPredicted RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 NDUFA9Q16795 377 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PARP15Q460N3 678 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 KCNIP4Q6PIL6 250 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 CCDC80Q76M96 950 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 BZW1Q7L1Q6 419 aaKnown RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 ARCQ7LC44 396 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 TAS2R42Q7RTR8 314 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 BIVMQ86UB2 503 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 SLC38A6Q8IZM9 456 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 LRRC75A-AS1Q8N1F1 130 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 DHRSXQ8N5I4 330 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 NPWQ8N729 165 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PRELID2Q8N945 189 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 OR4D5Q8NGN0 318 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 OR4Q3Q8NH05 313 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 M1APQ8TC57 530 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PIH1D2Q8WWB5 315 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PIGCQ92535 297 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 RAPGEF5Q92565 580 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 SNF8Q96H20 258 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 TPD52L3Q96J77 140 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 CELF6Q96J87 481 aaKnown RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 CNDP1Q96KN2 507 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 OR5B2Q96R09 309 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 FMO2Q99518 471 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 RIOK2Q9BVS4 552 aaKnown RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 HCAR1Q9BXC0 346 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 FRMD8P1Q9BZ68 369 aaPredicted RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PKIBQ9C010 78 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 OPN3Q9H1Y3 402 aaPredicted RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 DHX35Q9H5Z1 703 aaKnown RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 FN3KRPQ9HA64 309 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 FANCEQ9HB96 536 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 MEPEQ9NQ76 525 aaPredicted RBP3.56□□□□□ -1.84
TRA2B-201ENST00000259043 PCYOX1Q9UHG3 505 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF221Q9UK13 617 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 SNX24Q9Y343 169 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 MEGF8Q7Z7M0 2845 aa3.56□□□□□ -1.84
TRA2B-201ENST00000259043 TGP01266 2768 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms