RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SLAMF6Q96DU3 332 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 OR14A2Q96R54 314 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 KCNS3Q9BQ31 491 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 C1orf198Q9H425 327 aa15.35■□□□□ 0.05
SRSF1-201ENST00000258962 PLEKHB1Q9UF11 243 aaPredicted RBP15.35■□□□□ 0.05
SRSF1-201ENST00000258962 SPTAN1Q13813 2472 aaKnown RBP15.35■□□□□ 0.05
SRSF1-201ENST00000258962 CASKO14936 926 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF254O75437 659 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 NCR1O76036 304 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 BMP4P12644 408 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 CD40LGP29965 261 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 PTGER4P35408 488 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 CAV3P56539 151 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 XKRXQ6PP77 449 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 DEGS2Q6QHC5 323 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.34■□□□□ 0.05
SRSF1-201ENST00000258962 NR2C2APQ86WQ0 139 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 MFSD4AQ8N468 514 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 CEP19Q96LK0 163 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 DMRTA2Q96SC8 542 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 NELFAQ9H3P2 528 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 SMURF1Q9HCE7 757 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 CAMK2AQ9UQM7 478 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 POLR1DQ9Y2S0 133 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 ARHGAP21Q5T5U3 1957 aa15.34■□□□□ 0.05
SRSF1-201ENST00000258962 A1L4Q6 167 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 AHRRA9YTQ3 701 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 GPR171O14626 319 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 GATBO75879 557 aaKnown RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 UCHL1P09936 223 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF12P17014 697 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 MSR1P21757 451 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 CFL1P23528 166 aaKnown RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 CCR9P51686 369 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 LSM6P62312 80 aaKnown RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 ENDOGQ14249 297 aaKnown RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 SGCAQ16586 387 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 YIF1BQ5BJH7 314 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 CATSPERDQ86XM0 798 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF808Q8N4W9 903 aaPredicted RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 IL17RDQ8NFM7 739 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 ALKBH3Q96Q83 286 aaPredicted RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 ZNF416Q9BWM5 594 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 RBM24Q9BX46 236 aaKnown RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 RNF122Q9H9V4 155 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 BCO1Q9HAY6 547 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 PNRC2Q9NPJ4 139 aaKnown RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 CENPMQ9NSP4 180 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 COQ3Q9NZJ6 369 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 ASH2LQ9UBL3 628 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 SLC22A13Q9Y226 551 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 NOSIPQ9Y314 301 aaKnown RBP15.33■□□□□ 0.05
SRSF1-201ENST00000258962 R4GMQ9 66 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 DOPEY1Q5JWR5 2465 aa15.33■□□□□ 0.05
SRSF1-201ENST00000258962 ICE1Q9Y2F5 2266 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 USP9YO00507 2555 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-201ENST00000258962 FLNBO75369 2602 aaKnown RBP15.33■□□□□ 0.04
SRSF1-201ENST00000258962 TRBV5-5A0A0J9YX44 114 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 IQCMA0A1B0GVH7 501 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 A0A1W2PPK0 400 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 TMEM212A6NML5 194 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 PIN1P1O15428 100 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 H2BFMP0C1H6 154 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 MAGEB1P43366 347 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 ZNF84P51523 738 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 ADORA2A-AS1P86434 159 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 PMPCAQ10713 525 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 SPANXN2Q5MJ10 180 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 C1orf185Q5T7R7 199 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 TUSC5Q8IXB3 177 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 GPR137CQ8N3F9 429 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 OR2AJ1Q8NGZ0 328 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 OR10AC1Q8NH08 325 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 ITLN2Q8WWU7 325 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-201ENST00000258962 RND1Q92730 232 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 PPP1R14AQ96A00 147 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 PRDM14Q9GZV8 571 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 EMC3Q9P0I2 261 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 CLEC4AQ9UMR7 237 aa15.33■□□□□ 0.04
SRSF1-201ENST00000258962 PTPN13Q12923 2485 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 ACOD1A6NK06 481 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 ZNF724A8MTY0 619 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 ZNF879B4DU55 563 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 CTDSP2O14595 271 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 AGAP20933 346 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 MYL9P24844 172 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 PPP5CP53041 499 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 MRPS34P82930 218 aaKnown RBP15.32■□□□□ 0.04
SRSF1-201ENST00000258962 RIPPLY2Q5TAB7 128 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 NCCRP1Q6ZVX7 275 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-201ENST00000258962 CHMP1BQ7LBR1 199 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 ZNF676Q8N7Q3 588 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 PHYHIPQ92561 330 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 DERL3Q96Q80 235 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 PRRG4Q9BZD6 226 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 COMMD4Q9H0A8 199 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 CRLF2Q9HC73 371 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 EMC9Q9Y3B6 208 aa15.32■□□□□ 0.04
SRSF1-201ENST00000258962 FREM1Q5H8C1 2179 aa15.31■□□□□ 0.04
SRSF1-201ENST00000258962 TRAV1-2A0A0B4J238 106 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms