RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 STK16O75716 305 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TNFSF13O75888 250 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 S1PR2O95136 353 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RCBTB2O95199 551 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 CD160O95971 181 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 SCG5P05408 212 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 OR12D1P0DN82 309 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 ESDP10768 282 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TPSB2P20231 275 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 OR10J1P30954 320 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RPL3P39023 403 aaKnown RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 AVPR1BP47901 424 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 SOX2P48431 317 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 PTGES3Q15185 160 aaKnown RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TPSAB1Q15661 275 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 CEACAM21Q3KPI0 293 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 ARL13AQ5H913 290 aaPredicted RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 C22orf42Q6IC83 251 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RGMBQ6NW40 437 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 ABHD5Q8WTS1 349 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 FRZBQ92765 325 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 PIGTQ969N2 578 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 LRRC58Q96CX6 371 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 C1GALT1C1Q96EU7 318 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 WNT6Q9Y6F9 365 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TMPRSS11DO60235 418 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RAD51DO75771 328 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 BMP3P12645 472 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 LAMP2P13473 410 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 CHATP28329 748 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 HTR1EP28566 365 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 SLC6A11P48066 632 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RFX3P48380 749 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 PPOXP50336 477 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TIMM10P62072 90 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RPS23P62266 143 aaKnown RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 YBX1P67809 324 aaKnown RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 FZD5Q13467 585 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RPL22L1Q6P5R6 122 aaKnown RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 ERASQ7Z444 233 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM151AQ8N4L1 468 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF519Q8TB69 540 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 SORCS1Q8WY21 1168 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RERGQ96A58 199 aaPredicted RBP6.97□□□□□ -1.29
GPNMB-201ENST00000258733 PTH2Q96A98 100 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 SNX22Q96L94 193 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RBKSQ9H477 322 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 CLMPQ9H6B4 373 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RAB18Q9NP72 206 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 PXMP2Q9NR77 195 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM100Q9NV29 134 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 RNF115Q9Y4L5 304 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 ENTPD2Q9Y5L3 495 aa6.97□□□□□ -1.29
GPNMB-201ENST00000258733 PTPRJQ12913 1337 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 BCL2L11O43521 198 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 SYT7O43581 403 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 DUX1O43812 170 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 UTS2O95399 124 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 SDHBP21912 280 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 GATA3P23771 443 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 TPI1P60174 286 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 CDK5Q00535 292 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF750Q32MQ0 723 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 ALG10BQ5I7T1 473 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 PSAPL1Q6NUJ1 521 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 MBOAT2Q6ZWT7 520 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 CPEB2Q7Z5Q1 589 aaKnown RBP6.96□□□□□ -1.29
GPNMB-201ENST00000258733 PGBD5Q8N414 524 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 OR51F2Q8NH61 342 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 RNF141Q8WVD5 230 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 NUDCD2Q8WVJ2 157 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 DUX5Q96PT3 197 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 TRIB1Q96RU8 372 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 SLC46A2Q9BY10 475 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 TXNL4BQ9NX01 149 aaKnown RBP6.96□□□□□ -1.29
GPNMB-201ENST00000258733 GALPQ9UBC7 116 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 KCNE5Q9UJ90 142 aa6.96□□□□□ -1.29
GPNMB-201ENST00000258733 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.96□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF891A8MT65 544 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-201ENST00000258733 EEF1E1O43324 174 aaKnown RBP6.96□□□□□ -1.3
GPNMB-201ENST00000258733 FGF17O60258 216 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 LRP3O75074 770 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 TOX4O94842 621 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 TFPIP10646 304 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 AREGP15514 252 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 SESN2P58004 480 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-201ENST00000258733 GABRA6Q16445 453 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 TCTN1Q2MV58 587 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 HECTD2Q5U5R9 776 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 WDR53Q7Z5U6 358 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-201ENST00000258733 TOMM5Q8N4H5 51 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 REPS2Q8NFH8 660 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 OR1P1Q8NH06 330 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF296Q8WUU4 475 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-201ENST00000258733 FAM151AQ8WW52 585 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 KIRREL1Q96J84 757 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 RSG1Q9BU20 258 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 SLC32A1Q9H598 525 aa6.96□□□□□ -1.3
GPNMB-201ENST00000258733 APOBEC3GQ9HC16 384 aaKnown RBP6.96□□□□□ -1.3
GPNMB-201ENST00000258733 GPR35Q9HC97 309 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms