RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 TRAV36DV7A0A075B6V5 113 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 SIGLEC5O15389 551 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 XRCC3O43542 346 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 SEMA7AO75326 666 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 GLSO94925 669 aaPredicted RBP8.4□□□□□ -1.06
COL21A1-201ENST00000244728 CNOT4O95628 575 aaKnown RBP8.4□□□□□ -1.06
COL21A1-201ENST00000244728 CLDN6P56747 220 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 SIGLEC14Q08ET2 396 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 MANEAQ5SRI9 462 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 LRRC69Q6ZNQ3 347 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 PGAP1Q75T13 922 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 ZNF679Q8IYX0 411 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 SGCZQ96LD1 299 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 ENKD1Q9H0I2 346 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 SMOC1Q9H4F8 434 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 CTSFQ9UBX1 484 aa8.4□□□□□ -1.06
COL21A1-201ENST00000244728 IGHV3-64DA0A0J9YX35 117 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 RFPL4AA6NLU0 287 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 LMO7DNF2Z398 122 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 RFPL4AL1F8VTS6 287 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 BHLHE40O14503 412 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 IGF2P01344 180 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 NMBP08949 121 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 MALLQ13021 153 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 SLC36A2Q495M3 483 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 HSD17B13Q7Z5P4 300 aaPredicted RBP8.4□□□□□ -1.07
COL21A1-201ENST00000244728 YRDCQ86U90 279 aaKnown RBP8.4□□□□□ -1.07
COL21A1-201ENST00000244728 COMTD1Q86VU5 262 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 OR1J2Q8NGS2 313 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 SPTSSAQ969W0 71 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 OR2A5Q96R48 311 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 PFDN5Q99471 154 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 OPN4Q9UHM6 478 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 HIF3AQ9Y2N7 669 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 MMACHCQ9Y4U1 282 aa8.4□□□□□ -1.07
COL21A1-201ENST00000244728 A0A1B0GTH9 108 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 ANKRD20A5PA0PJZ0 165 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 A8MVM7 634 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SHISA8B8ZZ34 492 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SSX5O60225 188 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 AQP8O94778 261 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SNRPNP63162 240 aaKnown RBP8.39□□□□□ -1.07
COL21A1-201ENST00000244728 DUSP2Q05923 314 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 ECH1Q13011 328 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SMAD4Q13485 552 aaKnown RBP8.39□□□□□ -1.07
COL21A1-201ENST00000244728 FZD2Q14332 565 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 PRTGQ2VWP7 1150 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 PAN3Q58A45 887 aaKnown RBP8.39□□□□□ -1.07
COL21A1-201ENST00000244728 LPCAT3Q6P1A2 487 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SLC43A2Q8N370 569 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 OR2G2Q8NGZ5 317 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 OR4K15Q8NH41 348 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 MARVELD3Q96A59 401 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 C14orf79Q96F83 325 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 KCNJ16Q9NPI9 418 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SLC22A13Q9Y226 551 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 CSAG2Q9Y5P2 127 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 DOCK4Q8N1I0 1966 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 GSTZ1O43708 216 aaPredicted RBP8.39□□□□□ -1.07
COL21A1-201ENST00000244728 ZNF254O75437 659 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 ACKR1Q16570 336 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 PWWP2BQ6NUJ5 590 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 LANCL3Q6ZV70 420 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 AAED1Q7RTV5 226 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 DCXRQ7Z4W1 244 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 ADGRE4PQ86SQ3 457 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 TINAGL1Q9GZM7 467 aaPredicted RBP8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SLCO5A1Q9H2Y9 848 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 MTFP1Q9UDX5 166 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 NDRG3Q9UGV2 375 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 GPR160Q9UJ42 338 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 PCDHB10Q9UN67 800 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 CCDC163A0A0D9SF12 145 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SLC22A23A1A5C7 686 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 PMP2P02689 132 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 OR8U9P0C7N5 309 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 EDN3P14138 238 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 CPN1P15169 458 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 CCR5P51681 352 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 EPHA4P54764 986 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 FOXL2P58012 376 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 ZNF273Q14593 569 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 TMEM71Q6P5X7 295 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 MRPL21Q7Z2W9 205 aaKnown RBP8.39□□□□□ -1.07
COL21A1-201ENST00000244728 OR2W3Q7Z3T1 314 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 SPEM1Q8N4L4 309 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 FGGYQ96C11 551 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 DCBLD2Q96PD2 775 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 C1orf198Q9H425 327 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 CCDC86Q9H6F5 360 aaKnown RBP8.39□□□□□ -1.07
COL21A1-201ENST00000244728 IFT22Q9H7X7 185 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 CALHM2Q9HA72 323 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 TAS2R4Q9NYW5 299 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 PCNX1Q96RV3 2341 aa8.39□□□□□ -1.07
COL21A1-201ENST00000244728 TMEM200CA6NKL6 621 aa8.38□□□□□ -1.07
COL21A1-201ENST00000244728 HMSDA8MTL9 139 aa8.38□□□□□ -1.07
COL21A1-201ENST00000244728 HSPB6O14558 160 aa8.38□□□□□ -1.07
COL21A1-201ENST00000244728 SPINT1O43278 529 aa8.38□□□□□ -1.07
COL21A1-201ENST00000244728 MRPL33O75394 65 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms