RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ODF4Q2M2E3 257 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 CCDC92Q53HC0 331 aaPredicted RBP20.91■□□□□ 0.94
RRP9-201ENST00000232888 ZNF627Q7L945 461 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 ABHD12BQ7Z5M8 362 aaPredicted RBP20.91■□□□□ 0.94
RRP9-201ENST00000232888 OR51A4Q8NGJ6 313 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 ASB5Q8WWX0 329 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 FBXO17Q96EF6 278 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 GMPPAQ96IJ6 420 aaPredicted RBP20.91■□□□□ 0.94
RRP9-201ENST00000232888 SLC7A10Q9NS82 523 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 CLCF1Q9UBD9 225 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 DAPK2Q9UIK4 370 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 FOXJ3Q9UPW0 622 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 TIMM10BQ9Y5J6 103 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 V9GY05 133 aa20.91■□□□□ 0.94
RRP9-201ENST00000232888 TTLL8A6PVC2 850 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 TTRP02766 147 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 ZNF181Q2M3W8 571 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 P4HA3Q7Z4N8 544 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 BTLAQ7Z6A9 289 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 ZNF100Q8IYN0 542 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 RBMXL3Q8N7X1 1067 aaKnown RBP20.9■□□□□ 0.94
RRP9-201ENST00000232888 PPP1R14AQ96A00 147 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 DIRAS2Q96HU8 199 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 TAAR6Q96RI8 345 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 CCDC32Q9BV29 185 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 CKLFQ9UBR5 152 aa20.9■□□□□ 0.94
RRP9-201ENST00000232888 AK6Q9Y3D8 172 aaKnown RBP20.9■□□□□ 0.94
RRP9-201ENST00000232888 LOC107986453A0A1B0GWG9 222 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 AIPO00170 330 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 TGM6O95932 706 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 ZNF12P17014 697 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 FSTP19883 344 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 OTX1P32242 354 aaPredicted RBP20.89■□□□□ 0.94
RRP9-201ENST00000232888 MAGEB1P43366 347 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 CX3CR1P49238 355 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 SF3B4Q15427 424 aaKnown RBP eCLIP20.89■□□□□ 0.941e-7■■■■□ 21.2
RRP9-201ENST00000232888 LRRTM1Q86UE6 522 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 ZNF283Q8N7M2 679 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 SPTSSAQ969W0 71 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 CMTM3Q96MX0 182 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 UPB1Q9UBR1 384 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 CACNA1CQ13936 2221 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 ZNF407Q9C0G0 2248 aa20.89■□□□□ 0.94
RRP9-201ENST00000232888 AHRRA9YTQ3 701 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 UPK1BO75841 260 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 ACSM4P0C7M7 580 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 AGTR1P30556 359 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 PRKXP51817 358 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 ZNF121P58317 390 aaPredicted RBP20.89■□□□□ 0.93
RRP9-201ENST00000232888 SLC25A35Q3KQZ1 300 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 ZNF813Q6ZN06 617 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 PLEK2Q9NYT0 353 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 CLEC4AQ9UMR7 237 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 SLC5A6Q9Y289 635 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 V9GYH0 126 aa20.89■□□□□ 0.93
RRP9-201ENST00000232888 ISPDA4D126 451 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 FABP12A6NFH5 140 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 IFITM5A6NNB3 132 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 SGCEO43556 437 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 HPGDSO60760 199 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 SS18L1O75177 396 aaPredicted RBP20.88■□□□□ 0.93
RRP9-201ENST00000232888 PDGFAP04085 211 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 B4GALT1P15291 398 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 CFPP27918 469 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 EVX1P49640 407 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 XKRXQ6PP77 449 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 SLC16A14Q7RTX9 510 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 LUZP2Q86TE4 346 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 LRRC28Q86X40 367 aaPredicted RBP20.88■□□□□ 0.93
RRP9-201ENST00000232888 CCDC54Q8NEL0 328 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 OR13C3Q8NGS6 347 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 SH3GL3Q99963 347 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 SLC25A18Q9H1K4 315 aa20.88■□□□□ 0.93
RRP9-201ENST00000232888 DNAJC13O75165 2243 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 MEGF11A6BM72 1044 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 ATF1P18846 271 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 NUFIP2Q7Z417 695 aaKnown RBP20.87■□□□□ 0.93
RRP9-201ENST00000232888 FGD2Q7Z6J4 655 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 WNT2BQ93097 391 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 SP140LQ9H930 580 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 BRD7Q9NPI1 651 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 ATPIF1Q9UII2 106 aa20.87■□□□□ 0.93
RRP9-201ENST00000232888 TNRC6AQ8NDV7 1962 aaKnown RBP20.86■□□□□ 0.93
RRP9-201ENST00000232888 A0A1B0GVI7 797 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 P2RY10O00398 339 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 SYT7O43581 403 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 SCAND1P57086 179 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 TMPRSS3P57727 454 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 ARF1P84077 181 aaKnown RBP20.86■□□□□ 0.93
RRP9-201ENST00000232888 TBR1Q16650 682 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 PLXDC2Q6UX71 529 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 PRSS45Q7RTY3 260 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 DPPA2Q7Z7J5 298 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 ZNF433Q8N7K0 673 aaPredicted RBP20.86■□□□□ 0.93
RRP9-201ENST00000232888 OR1F12Q8NHA8 337 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 TRMT10AQ8TBZ6 339 aaKnown RBP20.86■□□□□ 0.93
RRP9-201ENST00000232888 GFI1Q99684 422 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 SOSTQ9BQB4 213 aa20.86■□□□□ 0.93
RRP9-201ENST00000232888 ZNF275Q9NSD4 429 aaPredicted RBP20.86■□□□□ 0.93
RRP9-201ENST00000232888 SPATA2Q9UM82 520 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms