RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 GSKIPQ9P0R6 139 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 ICAM5Q9UMF0 924 aa12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 PUS1Q9Y606 427 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDHB3-201ENST00000231130 KIF26BQ2KJY2 2108 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 KIAA1549LQ6ZVL6 1849 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 CXorf51AA0A1B0GTR3 108 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 CXCL10P02778 98 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 QDPRP09417 244 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 COX5BP10606 129 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 CD96P40200 585 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 LSSP48449 732 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 RAB11BQ15907 218 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 ITPRIPL2Q3MIP1 535 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 ALG10Q5BKT4 473 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 WFIKKN2Q8TEU8 576 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 PIK3IP1Q96FE7 263 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 SERINC2Q96SA4 455 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 GRHPRQ9UBQ7 328 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 DNAJB11Q9UBS4 358 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF736B4DX44 427 aaPredicted RBP12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 H0YGG7 62 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 SOX1O00570 391 aaPredicted RBP12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 UPK3AO75631 287 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 GPR75O95800 540 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 SNRPCP09234 159 aaKnown RBP12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 FOLR2P14207 255 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 FABP4P15090 132 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF84P51523 738 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 ARF3P61204 181 aaPredicted RBP12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 GVQW1Q8N7I0 195 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 RBM18Q96H35 190 aaKnown RBP12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 S100A13Q99584 98 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 CCDC3Q9BQI4 270 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 COLEC10Q9Y6Z7 277 aa12.76□□□□□ -0.37
PCDHB3-201ENST00000231130 FREM3P0C091 2139 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF726A6NNF4 738 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CDC40O60508 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 FGF19O95750 216 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CTSBP07858 339 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 STARD6P59095 220 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 RPS15AP62244 130 aaKnown RBP12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CEBPEQ15744 281 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 MEP1BQ16820 701 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 DMRTC1Q5HYR2 192 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ANKRD16Q6P6B7 361 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 FIGLAQ6QHK4 219 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 DPY19L2P2Q6ZN68 376 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ELOVL3Q9HB03 270 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ZDHHC8Q9ULC8 765 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 AMDHD2Q9Y303 409 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 OR6A2O95222 327 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 NUDT14O95848 222 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 WNT11O96014 354 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 SPARCP09486 303 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CAV2P51636 162 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 S100A10P60903 97 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 PSG6Q00889 435 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 RELQ04864 619 aaPredicted RBP12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 BIKQ13323 160 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 MOGAT2Q3SYC2 334 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 IL34Q6ZMJ4 242 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 RCBTB1Q8NDN9 531 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 OR9A4Q8NGU2 314 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 OR14K1Q8NGZ2 314 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 C15orf40Q8WUR7 153 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 SMIM3Q9BZL3 60 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 RNF208Q9H0X6 261 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ETV7Q9Y603 341 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 A0A087WV62 115 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 C17orf51A8MQB3 221 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF705GA8MUZ8 300 aaPredicted RBP12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 NPIPB9F8W1W9 429 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 IGHV2-5P01817 119 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 OR13C7P0DN81 318 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 MAOAP21397 527 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 TM4SF4P48230 202 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CSNK1EP49674 416 aaKnown RBP12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CST6Q15828 149 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 PRICKLE4Q2TBC4 344 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 TEX30Q5JUR7 227 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 TCEAL6Q6IPX3 200 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CLEC1AQ8NC01 280 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 OR51A2Q8NGJ7 313 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF417Q8TAU3 575 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 THOC3Q96J01 351 aaKnown RBP12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 CMTM3Q96MX0 182 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 SOX7Q9BT81 388 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 RNF122Q9H9V4 155 aa12.75□□□□□ -0.37
PCDHB3-201ENST00000231130 MED19A0JLT2 244 aaPredicted RBP12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 C4orf17Q53FE4 359 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 C2orf27AQ580R0 203 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 WDR38Q5JTN6 314 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 AKR1C8PQ5T2L2 129 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 AGBL4Q5VU57 503 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 MARCH3Q86UD3 253 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms