RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ZDHHC8Q9ULC8 765 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 CDH10Q9Y6N8 788 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 U3KQV3 271 aa12.07□□□□□ -0.48
GPN3-201ENST00000228827 IDH3BO43837 385 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 UBOX5O94941 541 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 MSMBP08118 114 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 PYCR1P32322 319 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 MAGEA2P43356 314 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 HMGA2P52926 109 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 HIST1H3AP68431 136 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 TRIM25Q14258 630 aaKnown RBP12.06□□□□□ -0.48
GPN3-201ENST00000228827 ZMAT1Q5H9K5 638 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 HIST2H3PS2Q5TEC6 136 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 Q6ZR03 302 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 HIST2H3AQ71DI3 136 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 CYB561A3Q8NBI2 242 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 AQP11Q8NBQ7 271 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 SLC26A10Q8NG04 563 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 OR8D4Q8NGM9 314 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 OR51F2Q8NH61 342 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 TMEM158Q8WZ71 300 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 RAB1CQ92928 201 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 HAVCR1Q96D42 359 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 DIRC2Q96SL1 478 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 PITX2Q99697 317 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 COQ7Q99807 217 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 CDADC1Q9BWV3 514 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 TRIM15Q9C019 465 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 HDHD2Q9H0R4 259 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 MUC13Q9H3R2 512 aa12.06□□□□□ -0.48
GPN3-201ENST00000228827 CD55P08174 381 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 ADH4P08319 380 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 KITLGP21583 273 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 TUBG1P23258 451 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 RGS6P49758 472 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 COX10Q12887 443 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 SLC36A3Q495N2 470 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 FAM98BQ52LJ0 330 aaKnown RBP12.05□□□□□ -0.48
GPN3-201ENST00000228827 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 ZNF770Q6IQ21 691 aaPredicted RBP12.05□□□□□ -0.48
GPN3-201ENST00000228827 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 ZBTB46Q86UZ6 589 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 LINC00471Q8N535 108 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 OR2AJ1Q8NGZ0 328 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 PTP4A1Q93096 173 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 COG8Q96MW5 612 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 DCLRE1CQ96SD1 692 aaKnown RBP12.05□□□□□ -0.48
GPN3-201ENST00000228827 GAL3ST1Q99999 423 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 MAGIXQ9H6Y5 334 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 WDR76Q9H967 626 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 TBC1D23Q9NUY8 699 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 DCAF16Q9NXF7 216 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 ATPIF1Q9UII2 106 aa12.05□□□□□ -0.48
GPN3-201ENST00000228827 SAMHD1Q9Y3Z3 626 aaKnown RBP12.05□□□□□ -0.48
GPN3-201ENST00000228827 YLPM1P49750 1951 aaKnown RBP12.05□□□□□ -0.48
GPN3-201ENST00000228827 BHLHE40O14503 412 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 SOX14O95416 240 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 PCMT1P22061 227 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 TNFSF4P23510 183 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 RPS27P42677 84 aaKnown RBP12.04□□□□□ -0.48
GPN3-201ENST00000228827 PRSS12P56730 875 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 MICAQ29983 383 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 ACSM5Q6NUN0 579 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 RPL13AP3Q6NVV1 102 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 FAHD2BQ6P2I3 314 aaPredicted RBP12.04□□□□□ -0.48
GPN3-201ENST00000228827 RASSF6Q6ZTQ3 369 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 PROKR2Q8NFJ6 384 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 OR51L1Q8NGJ5 315 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 OR5L1Q8NGL2 311 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 ZNRF4Q8WWF5 429 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 RAB39BQ96DA2 213 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 FAHD2AQ96GK7 314 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 LRGUKQ96M69 825 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 REEP1Q9H902 201 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 MRPL22Q9NWU5 206 aaKnown RBP12.04□□□□□ -0.48
GPN3-201ENST00000228827 TAS2R1Q9NYW7 299 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
GPN3-201ENST00000228827 PRPF19Q9UMS4 504 aaKnown RBP12.04□□□□□ -0.48
GPN3-201ENST00000228827 TVP23AA6NH52 213 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 F5H5K5 113 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 DEAF1O75398 565 aaPredicted RBP12.03□□□□□ -0.48
GPN3-201ENST00000228827 IGHV2-5P01817 119 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 RAC2P15153 192 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 GGT2P36268 569 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 SLC3A1Q07837 685 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 RSPO1Q2MKA7 263 aaPredicted RBP12.03□□□□□ -0.48
GPN3-201ENST00000228827 KRTAP24-1Q3LI83 254 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 OR2T5Q6IEZ7 315 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 LYPD4Q6UWN0 246 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 FBXW12Q6X9E4 464 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 PEG10Q86TG7 708 aaKnown RBP12.03□□□□□ -0.48
GPN3-201ENST00000228827 ATG16L2Q8NAA4 619 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 SLC37A3Q8NCC5 494 aa12.03□□□□□ -0.48
GPN3-201ENST00000228827 BHLHE23Q8NDY6 225 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms