RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CTHRC1Q96CG8 243 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 NRSN2Q9GZP1 204 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 SYT4Q9H2B2 425 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 FBXL21Q9UKT6 434 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ZNF729A6NN14 1252 aaPredicted RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 WRBO00258 174 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ST8SIA5O15466 376 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 PPIHO43447 177 aaKnown RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 IGHV2-5P01817 119 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 CRHP06850 196 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 GDI1P31150 447 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ACAA2P42765 397 aaKnown RBP12.67□□□□□ -0.38
SF1-201ENST00000227503 CAV2P51636 162 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ACTBP60709 375 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ACTG1P63261 375 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 RNF212Q495C1 297 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 GLYATL3Q5SZD4 288 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 RTTNQ86VV8 2226 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 C10orf53Q8N6V4 93 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 C15orf54Q8N8G6 183 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 OR10G6Q8NH81 332 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 ZNF563Q8TA94 476 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 RPS4Y2Q8TD47 263 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 FAM3CQ92520 227 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 CMKLR1Q99788 373 aa12.67□□□□□ -0.38
SF1-201ENST00000227503 NKX2-2O95096 273 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 CD63P08962 238 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 KIR3DL2P43630 455 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 NFATC4Q14934 902 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 ITPRIPL2Q3MIP1 535 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 Q3ZCU0 254 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 WDR38Q5JTN6 314 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 RPL7L1Q6DKI1 246 aaKnown RBP12.66□□□□□ -0.38
SF1-201ENST00000227503 DGAT2L6Q6ZPD8 337 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 TCTEX1D2Q8WW35 142 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 HOXB13Q92826 284 aaPredicted RBP12.66□□□□□ -0.38
SF1-201ENST00000227503 FAM46BQ96A09 425 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 ZFYVE21Q9BQ24 234 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 SLC25A21Q9BQT8 299 aaPredicted RBP12.66□□□□□ -0.38
SF1-201ENST00000227503 POLE3Q9NRF9 147 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 CACFD1Q9UGQ2 172 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 AMDHD2Q9Y303 409 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 C7orf77A4D0Y5 90 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 F8VVB4 439 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 F8VWA3 439 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 GMFGO60234 142 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 PVRP15151 417 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 NDUFB7P17568 137 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 COL9A1P20849 921 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 GPR18Q14330 331 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 ELOCQ15369 112 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 SLC9A3R2Q15599 337 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 PAPD4Q6PIY7 484 aaKnown RBP12.66□□□□□ -0.38
SF1-201ENST00000227503 OR10H5Q8NGA6 315 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 ANKRD9Q96BM1 317 aaPredicted RBP12.66□□□□□ -0.38
SF1-201ENST00000227503 RPP25Q9BUL9 199 aaKnown RBP12.66□□□□□ -0.38
SF1-201ENST00000227503 LAMP5Q9UJQ1 280 aa12.66□□□□□ -0.38
SF1-201ENST00000227503 MRPS18BQ9Y676 258 aaKnown RBP12.66□□□□□ -0.38
SF1-201ENST00000227503 CNTRLQ7Z7A1 2325 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 LOC100289279A0A1B0GTE1 492 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 GLCEO94923 617 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 ABHD16AO95870 558 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 LAP3P28838 519 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 TNFRSF4P43489 277 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 CYB5R2Q6BCY4 276 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 CLEC9AQ6UXN8 241 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 CA13Q8N1Q1 262 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 SLAMF9Q96A28 289 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 KIRREL1Q96J84 757 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 BMFQ96LC9 184 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 PHB2Q99623 299 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 SMIM3Q9BZL3 60 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
SF1-201ENST00000227503 TEX13DA0A0J9YY54 714 aaPredicted RBP12.65□□□□□ -0.38
SF1-201ENST00000227503 A0A1W2PQF6 199 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 IFITM10A6NMD0 228 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 MBTPS2O43462 519 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 CD1AP06126 327 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 CA3P07451 260 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 IFI6P09912 130 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 RAB5AP20339 215 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 SPOCK1Q08629 439 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 LINC00114Q6XXX2 140 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 FRMD1Q8N878 549 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 GATSQ8NAP1 163 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 TMEM229BQ8NBD8 167 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 GPR148Q8TDV2 347 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 RSC1A1Q92681 617 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 WDR92Q96MX6 357 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 GABRG3Q99928 467 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 MRI1Q9BV20 369 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 EGLN1Q9GZT9 426 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 DOCK8Q8NF50 2099 aa12.65□□□□□ -0.38
SF1-201ENST00000227503 TRBV5-7A0A0A0MS05 114 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 WIPF3A6NGB9 483 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 IGKV1D-16P01601 117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms