RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 MRPS18AQ9NVS2 196 aaKnown RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 FBXL3Q9UKT7 428 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 NPIPA1Q9UND3 350 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 PYCARD-AS1I3L0S3 204 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 C4BPBP20851 252 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 MMP15P51511 669 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 SEC61A1P61619 476 aaKnown RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 GK2Q14410 553 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 FNDC7Q5VTL7 733 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 CD300LDQ6UXZ3 194 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 GALNTL5Q7Z4T8 443 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 OR10K1Q8NGX5 313 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 SYNPRQ8TBG9 265 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 UBL7Q96S82 380 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 PIPOXQ9P0Z9 390 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 CYB5R1Q9UHQ9 305 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 IGKV1D-42A0A075B6H8 117 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 KRT33AO76009 404 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 MAS1P04201 325 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 CD96P40200 585 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 PTH2RP49190 550 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 EGR4Q05215 589 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 AIMP2Q13155 320 aaKnown RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 RSPO4Q2I0M5 234 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 MFFQ9GZY8 342 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 KCNK15Q9H427 330 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 LDAHQ9H6V9 325 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 ATPIF1Q9UII2 106 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 KIF25Q9UIL4 384 aa10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 CHCHD2Q9Y6H1 151 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP1-201ENST00000226225 UBE2QL1A1L167 161 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 TVP23AA6NH52 213 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 WDPCPO95876 746 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 MSX1P28360 303 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 OR1C1Q15619 314 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 BVESQ8NE79 360 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 OR4D10Q8NGI6 311 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 STK35Q8TDR2 534 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 SYT4Q9H2B2 425 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 EXOGQ9Y2C4 368 aaKnown RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 SLC6A5Q9Y345 797 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 PLSCR5A0PG75 271 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 KRBOX1C9JBD0 128 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 RENP00797 406 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 CD14P08571 375 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 SBK2P0C263 348 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 APOBEC1P41238 236 aaKnown RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 RPS27P42677 84 aaKnown RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 H2BFSP57053 126 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF85Q03923 595 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 PCGF3Q3KNV8 242 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 SHEQ5VZ18 495 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 LIN54Q6MZP7 749 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 ST8SIA1Q92185 356 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 SLC25A28Q96A46 364 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 ACTR6Q9GZN1 396 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 MED29Q9NX70 200 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 POLR1DQ9Y2S0 133 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 IGHV3-15A0A0B4J1V0 119 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 EIF1AYO14602 144 aaKnown RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 BET1O15155 118 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 LYPD3O95274 346 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 CYC1P08574 325 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 CBR1P16152 277 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 EIF1AXP47813 144 aaKnown RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 RRADP55042 308 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 PLA2G7Q13093 441 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 WIPI1Q5MNZ9 446 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 OR7E24Q6IFN5 339 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 CBLN2Q8IUK8 224 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF511Q8NB15 262 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 FAM71CQ8NEG0 241 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMEM185AQ8NFB2 350 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 SMIM4Q8WVI0 70 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 SEC22AQ96IW7 307 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 USB1Q9BQ65 265 aaKnown RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 PRRG4Q9BZD6 226 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 PTTG3PQ9NZH4 202 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 KLHL9Q9P2J3 617 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 KLHL13Q9P2N7 655 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF230Q9UIE0 474 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 IKZF2Q9UKS7 526 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 MOKQ9UQ07 419 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 CAMK2AQ9UQM7 478 aa10.47□□□□□ -0.73
TNFAIP1-201ENST00000226225 A0A1B0GTH9 108 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 GPR31O00270 319 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 LTBQ06643 244 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 C3orf33Q6P1S2 294 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 GID4Q8IVV7 300 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 LNX2Q8N448 690 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 WDSUB1Q8N9V3 476 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 CPNE2Q96FN4 548 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 SLC19A3Q9BZV2 496 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 SEC61A2Q9H9S3 476 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 GPN1Q9HCN4 374 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 TNRC6BQ9UPQ9 1833 aaKnown RBP10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.46□□□□□ -0.73
TNFAIP1-201ENST00000226225 A0A0G2JMM0 328 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms