RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CCL2P13500 99 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 GGTLC2Q14390 218 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 FAAP20Q6NZ36 180 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 FUNDC1Q8IVP5 155 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 OR4A16Q8NH70 328 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 RAB1CQ92928 201 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 TRPM6Q9BX84 2022 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 ACER3Q9NUN7 267 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 HIF1ANQ9NWT6 349 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 EHFQ9NZC4 300 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 MEIKINA0A087WXM9 373 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 SIX6O95475 246 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 ATP1B1P05026 303 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 CELA2AP08217 269 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 LTBQ06643 244 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 C1QL3Q5VWW1 255 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 CELF2-AS1Q8N7Q2 184 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 SLC30A7Q8NEW0 376 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 AP1S3Q96PC3 154 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 ANKRD19PQ9H560 264 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 PIGBOS1A0A0B4J2F0 54 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 OR6C6A6NF89 314 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 PRF1P14222 555 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 TNFSF8P32971 234 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 TNFAIP6P98066 277 aaPredicted RBP12.4□□□□□ -0.42
SIX4-201ENST00000216513 KRTCAP3Q53RY4 240 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 ENTHD1Q8IYW4 607 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 UCK1Q9HA47 277 aa12.4□□□□□ -0.42
SIX4-201ENST00000216513 TCRBV3S1A0A5B6 114 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 UPK1BO75841 260 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 IFNA4P05014 189 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 ZNF91Q05481 1191 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 MRGPRGQ86SM5 289 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 BBS1Q8NFJ9 593 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 FNDC9Q8TBE3 224 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 PDCD1LG2Q9BQ51 273 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 BCL7BQ9BQE9 202 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 BANF2Q9H503 90 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 A0A0G2JMP0 313 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 HSD17B6O14756 317 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 KLF3P57682 345 aaPredicted RBP12.39□□□□□ -0.43
SIX4-201ENST00000216513 THSD4Q6ZMP0 1018 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 OR4M2Q8NGB6 313 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 OR51F2Q8NH61 342 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 STK35Q8TDR2 534 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 NICN1Q9BSH3 213 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 ACTL6AO96019 429 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 DHRS4L2Q6PKH6 230 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 VN1R4Q7Z5H5 301 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 TSSK2Q96PF2 358 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 ATF6BQ99941 703 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 RHNO1Q9BSD3 238 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 FAM221AA4D161 298 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 HAX1O00165 279 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 CD96P40200 585 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 BATFQ16520 125 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 PXKQ7Z7A4 578 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 ZNF679Q8IYX0 411 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 BABAM2Q9NXR7 383 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 IGLV3-16A0A075B6K0 115 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 LOC101059948A0A1B0GTJ6 334 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 CBR1P16152 277 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 PCSK6P29122 969 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 S100A12P80511 92 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 SNTB1Q13884 538 aaKnown RBP12.39□□□□□ -0.43
SIX4-201ENST00000216513 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 OR5B12Q96R08 314 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 WDR54Q9H977 334 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 SERTAD4Q9NUC0 356 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 FBXL2Q9UKC9 423 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 PRELID3BQ9Y3B1 194 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 ASB4Q9Y574 426 aa12.39□□□□□ -0.43
SIX4-201ENST00000216513 ZNF736B4DX44 427 aaPredicted RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 OR2T7P0C7T2 308 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 ADH6P28332 368 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 ZNF93P35789 620 aaPredicted RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 ARIH2OSQ8N7S6 290 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 RDH5Q92781 318 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 HRH4Q9H3N8 390 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 SLCO1C1Q9NYB5 712 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 PRELID1Q9Y255 219 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 KCNE1BA0A087WTH5 132 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 LRP3O75074 770 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 NKX6-1P78426 367 aaPredicted RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 MOB3BQ86TA1 216 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 TUSC5Q8IXB3 177 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 GOLM1Q8NBJ4 401 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 NOX4Q9NPH5 578 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 COPS3Q9UNS2 423 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 ASXL3Q9C0F0 2248 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 GABARAPL2P60520 117 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 SORDQ00796 357 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 SSX2Q16385 188 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms