RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Slc9a3r2Q9JHL1 337 aa20.27■□□□□ 0.84
Scn1b-201ENSMUST00000098548 Trav6-7-dv9A0A075B639 125 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm21149A0A0G2JFY7 255 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ddi2A2ADY9 399 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Scgb2b3D2XZ38 112 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Vmn2r28L7N203 852 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Dpm1O70152 260 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 JtbO88824 146 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Apoc2Q05020 97 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 SrmsQ62270 496 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Slc22a18Q78KK3 406 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr1321Q7TQW4 319 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Rgp1Q8BHT7 391 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Arhgap22Q8BL80 702 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Sdhaf4Q8BTE0 104 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Nadk2Q8C5H8 452 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Swi5Q8K3D3 89 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ccdc92Q8VDN4 314 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Taldo1Q93092 337 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 C1ql3Q9ESN4 255 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Kcnj16Q9Z307 419 aa20.26■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Zfp707F6QUN2 391 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Atxn2O70305 1285 aaKnown RBP20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Mst1P26928 716 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Cers1P27545 350 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Cdh11P55288 796 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 CdaP56389 146 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Cldn18P56857 264 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gpr143P70259 405 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Malt1Q2TBA3 832 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 2210407C18RikQ6YI28 220 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Vmn1r23Q8R2D0 302 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 PnpoQ91XF0 261 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ddah2Q99LD8 285 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Exosc5Q9CRA8 235 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 MeiobQ9D513 470 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 RelnQ60841 3461 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 CtcflA2APF3 636 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 4933403O08RikF6UK53 379 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 P01795 144 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tdpoz1P0DMR5 365 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm9125P0DMR6 365 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Cdk5r1P61809 307 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 MpgQ04841 333 aaKnown RBP20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Bex6Q3TZW7 114 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Fbxw20Q5U467 468 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Dvl2Q60838 736 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Wdfy2Q8BUB4 400 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm4922Q8C0N0 497 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Fam120cQ8C3F2 1091 aaKnown RBP20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tmprss3Q8K1T0 453 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Lsm10Q8QZX5 122 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tmem234Q8R1E7 140 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr1361Q8VFH0 317 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Dcp1aQ91YD3 602 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Sorcs2Q9EPR5 1159 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Trim39Q9ESN2 488 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Lpar2Q9JL06 348 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Znf346Q9R0B7 294 aa20.25■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Zfhx3Q61329 3726 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 NbeaQ9EPN1 2936 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm364A2AFI6 671 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm438B1ASB3 393 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 H3BKT1 185 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Cd46O88174 365 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gsta1P13745 223 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ppp3r1Q63810 170 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gsta1Q6P8Q0 223 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ppp1r14dQ7TT52 146 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 TiprlQ8BH58 271 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 LsampQ8BLK3 341 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ss18l1Q8BW22 402 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Trmt6Q8CE96 497 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Vmn1r231Q8R2A3 311 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr826Q8VFU6 313 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr825Q8VFU7 320 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Egln3Q91UZ4 239 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Basp1Q91XV3 226 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Dmac2Q9D7K5 258 aaKnown RBP20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Galnt16Q9JJ61 558 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gabrg1Q9R0Y8 465 aa20.24■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Igkv9-124A0A0G2JDR3 117 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm20695H3BLK7 282 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Hps1O08983 704 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Arl6O88848 186 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 C9P06683 548 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Hoxd4P10628 250 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 VtnP29788 478 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ctbp2P56546 445 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Barhl1P63157 327 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr1463Q7TQR3 310 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gpr139Q80UC8 345 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ticam1Q80UF7 732 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 SergefQ80YD6 464 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Slc6a15Q8BG16 729 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Rab39aQ8BHD0 217 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Peli1Q8C669 418 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Angptl8Q8R1L8 198 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr1052Q8VGR8 312 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Slc7a12Q8VIE6 465 aa20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms