RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SMIM19Q96E16 107 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 MAP6Q96JE9 813 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 KCTD7Q96MP8 289 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 ABHD6Q9BV23 337 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 HDHD5Q9BXW7 423 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 MROQ9BYG7 248 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 BARHL1Q9BZE3 327 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 KCNN2Q9H2S1 579 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 SEC61A2Q9H9S3 476 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 SLCO1C1Q9NYB5 712 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 TRBV2A0A0J9YWF9 115 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 A0A1B0GTH9 108 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 GPR171O14626 319 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 RGS9O75916 674 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 CD1AP06126 327 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 CDAP32320 146 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 SOX6P35712 828 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 GDI2P50395 445 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 ROM1Q03395 351 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 LINGO2Q7L985 606 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 KRT77Q7Z794 578 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF679Q8IYX0 411 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 OR10S1Q8NGN2 331 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 OR52N5Q8NH56 324 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 RNF128Q8TEB7 428 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 RGP1Q92546 391 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 GHSRQ92847 366 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 OR8B4Q96RC9 309 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 PRRG4Q9BZD6 226 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 ULBP2Q9BZM5 246 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 NXF2Q9GZY0 626 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 GALNT8Q9NY28 637 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF835Q9Y2P0 537 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 POLR1DQ9Y2S0 133 aa8.37□□□□□ -1.07
PDLIM5-223ENST00000627587 IGKV3D-15A0A087WSY6 115 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CD8B2A6NJW9 211 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 GPRIN2O60269 458 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SLC19A2O60779 497 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SLC43A1O75387 559 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SRSF10O75494 262 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 RPP14O95059 124 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CLDN14O95500 239 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SERPINA3P01011 423 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 IGHG3P01860 377 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CD8BP10966 210 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CPN1P15169 458 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 GTF3C1Q12789 2109 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 C10orf128Q5T292 105 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 FAM27D1Q5T7N8 215 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CORO6Q6QEF8 472 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 LRRN1Q6UXK5 716 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 FOXL2NBQ6ZUU3 175 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 AAED1Q7RTV5 226 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 DCXRQ7Z4W1 244 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 LINC00346Q8IVM7 164 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 C20orf196Q8IYI0 205 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 NABP1Q96AH0 204 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 C14orf79Q96F83 325 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SPOCK3Q9BQ16 436 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 PDCD1LG2Q9BQ51 273 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SIAEQ9HAT2 523 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CCDC59Q9P031 241 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 EMC3Q9P0I2 261 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CYB5R1Q9UHQ9 305 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CAMK2AQ9UQM7 478 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 LHFPL6Q9Y693 200 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 RTTNQ86VV8 2226 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNHIT1O43257 154 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 DHHO43323 396 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 ZFPL1O95159 310 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CDRT1O95170 752 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 PNPP00491 289 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 IL1AP01583 271 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 CLEC2LP0C7M8 214 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SDC2P34741 201 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF84P51523 738 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 RIDAP52758 137 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 ALKBH1Q13686 389 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 KCNMB1Q16558 191 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF404Q494X3 552 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 NR2C2APQ86WQ0 139 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 SIAH3Q8IW03 269 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 GPR137CQ8N3F9 429 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 PRSS35Q8N3Z0 413 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 OR2AJ1Q8NGZ0 328 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 FNDC9Q8TBE3 224 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 WNT2BQ93097 391 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 TMEM45BQ96B21 275 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 GPR137Q96N19 417 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 C1orf198Q9H425 327 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 ELOVL3Q9HB03 270 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 EMC7Q9NPA0 242 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 B3GAT2Q9NPZ5 323 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 POLE4Q9NR33 117 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 NOSIPQ9Y314 301 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 PDZD2O15018 2839 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 ANKRD17O75179 2603 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms