RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CAPGP40121 348 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 NAA10P41227 235 aaPredicted RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 RPS27P42677 84 aaKnown RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 GDI2P50395 445 aaKnown RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 AQP4P55087 323 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 SNRPGP62308 76 aaKnown RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 IL5RAQ01344 420 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 RAB35Q15286 201 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 TBC1D28Q2M2D7 210 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 SETD9Q8NE22 299 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 OR1J2Q8NGS2 313 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 UBE2FQ969M7 185 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 ZNF75AQ96N20 296 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 ZNF582Q96NG8 517 aaPredicted RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 CNN2Q99439 309 aaKnown RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 TEAD3Q99594 435 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 HDHD2Q9H0R4 259 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 MARCH7Q9H992 704 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 BEX4Q9NWD9 120 aaPredicted RBP12.75□□□□□ -0.37
PNKP-221ENST00000627317 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 ATP6V1G2-DDX39BF2Z307 99 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 H0YAE9 185 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 H0YJX3 145 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 ZNF593O00488 134 aaPredicted RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 SELENOFO60613 162 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 PLAUP00749 431 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 MRPL3P09001 348 aaKnown RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 STOMP27105 288 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 HTR1FP30939 366 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 ADARB1P78563 741 aaKnown RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 GALK2Q01415 458 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 IL18R1Q13478 541 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 TEX30Q5JUR7 227 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 ZNF691Q5VV52 312 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 MEDAGQ5VYS4 303 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 CFAP77Q6ZQR2 320 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 VASH1Q7L8A9 365 aaPredicted RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 SHFQ7M4L6 423 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 DPY19L4Q7Z388 723 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 TGIF2LYQ8IUE0 185 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 TIGD4Q8IY51 512 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 ENTHD1Q8IYW4 607 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 CPEB3Q8NE35 698 aaKnown RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 LILRB1Q8NHL6 650 aaPredicted RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 DLL4Q9NR61 685 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 CLN6Q9NWW5 311 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 WARS2Q9UGM6 360 aaKnown RBP12.74□□□□□ -0.37
PNKP-221ENST00000627317 ATP23Q9Y6H3 246 aa12.74□□□□□ -0.37
PNKP-221ENST00000627317 ACANP16112 2415 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 PLCE1Q9P212 2302 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 C5orf49A4QMS7 147 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 SNTNA6NMZ2 147 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 SHISA9B4DS77 424 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 ENTPD6O75354 484 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 CLIC3O95833 236 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 COX5BP10606 129 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 PSKH1P11801 424 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 CCNOP22674 350 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 CALCRP30988 508 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 VHLP40337 213 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 HSPA13P48723 471 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 HIST1H3AP68431 136 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 POU4F2Q12837 409 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 EIF2B1Q14232 305 aaKnown RBP12.73□□□□□ -0.37
PNKP-221ENST00000627317 GGTLC2Q14390 218 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 OCLNQ16625 522 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 PCK2Q16822 640 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 CCDC92Q53HC0 331 aaPredicted RBP12.73□□□□□ -0.37
PNKP-221ENST00000627317 ELFN2Q5R3F8 820 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 SLC25A30Q5SVS4 291 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 HIST2H3PS2Q5TEC6 136 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 C20orf204Q6ZNR8 217 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 HIST2H3AQ71DI3 136 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 DCXRQ7Z4W1 244 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 C8orf59Q8N0T1 100 aaPredicted RBP12.73□□□□□ -0.37
PNKP-221ENST00000627317 OR4F15Q8NGB8 312 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 OR1F12Q8NHA8 337 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 RHOXF1Q8NHV9 184 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 Q96MT0 163 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 UBTD1Q9HAC8 227 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 ATPIF1Q9UII2 106 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.73□□□□□ -0.37
PNKP-221ENST00000627317 SPEF1Q9Y4P9 236 aa12.73□□□□□ -0.37
PNKP-221ENST00000627317 OR6C6A6NF89 314 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 SYNGR3O43761 229 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 CCL2P13500 99 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 ATP6V1E1P36543 226 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 ECH1Q13011 328 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 SNTB2Q13425 540 aaKnown RBP12.72□□□□□ -0.37
PNKP-221ENST00000627317 TMED1Q13445 227 aa12.72□□□□□ -0.37
PNKP-221ENST00000627317 MAD2L1BPQ15013 274 aaPredicted RBP12.72□□□□□ -0.37
PNKP-221ENST00000627317 ZNF672Q499Z4 452 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms