RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 PHF3Q92576 2039 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 GPR179Q6PRD1 2367 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 LINC01387J3KSC0 135 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 SLC17A2O00624 439 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 ADRB1P08588 477 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 SLC6A1P30531 599 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 CD96P40200 585 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 EIF1AXP47813 144 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 GABREP78334 506 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 MRPS10P82664 201 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 DGCR2P98153 550 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 AIMP2Q13155 320 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 GLT8D1Q68CQ7 371 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 ASPHD2Q6ICH7 369 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 CFAP77Q6ZQR2 320 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 OR6N1Q8NGY5 312 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 SFXN2Q96NB2 322 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 FAM173AQ9BQD7 235 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 SRXN1Q9BYN0 137 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 NLKQ9UBE8 527 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 IGHV3-15A0A0B4J1V0 119 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 HMX3A6NHT5 357 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 CENPXA8MT69 81 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 SMAD9O15198 467 aaKnown RBP19.55■□□□□ 0.72
PNKP-220ENST00000627232 LRP3O75074 770 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 RFPL3SP0C7P2 107 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 ENPP1P22413 925 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 CDAP32320 146 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 GUCA1AP43080 201 aaPredicted RBP19.55■□□□□ 0.72
PNKP-220ENST00000627232 PSMA6P60900 246 aaKnown RBP19.55■□□□□ 0.72
PNKP-220ENST00000627232 FOXO1Q12778 655 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 FAM166AQ6J272 317 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 GGNQ86UU5 652 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 TOMM5Q8N4H5 51 aa19.55■□□□□ 0.72
PNKP-220ENST00000627232 ZNF385AQ96PM9 386 aaKnown RBP19.55■□□□□ 0.72
PNKP-220ENST00000627232 NUFIP1Q9UHK0 495 aaKnown RBP19.55■□□□□ 0.72
PNKP-220ENST00000627232 CDV3Q9UKY7 258 aaKnown RBP19.55■□□□□ 0.72
PNKP-220ENST00000627232 GABARAPH6UMI1 98 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 CDK2AP1O14519 115 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 CCNKO75909 580 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 TTRP02766 147 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 CD3GP09693 182 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 GDF1P27539 372 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 HLA-DMAP28067 261 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 CARD18P57730 90 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 DYRK1AQ13627 763 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 RAB11BQ15907 218 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 ZIC4Q8N9L1 334 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 CREB3L1Q96BA8 519 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 UTP23Q9BRU9 249 aaKnown RBP19.54■□□□□ 0.72
PNKP-220ENST00000627232 PBOV1Q9GZY1 135 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 SLC17A5Q9NRA2 495 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 TAS2R4Q9NYW5 299 aa19.54■□□□□ 0.72
PNKP-220ENST00000627232 H0YC42 278 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 P2RY10O00398 339 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 TRAPPC6AO75865 159 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 MSR1P21757 451 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 CD82P27701 267 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 HSD11B1P28845 292 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 PLA1AQ53H76 456 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 STPG1Q5TH74 334 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 LINGO2Q7L985 606 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 IZUMO1Q8IYV9 350 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 OR2V1Q8NHB1 315 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 ADGRG7Q96K78 797 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 FER1L6-AS2Q96M78 137 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 NELFAQ9H3P2 528 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 FOXD3Q9UJU5 478 aaPredicted RBP19.53■□□□□ 0.72
PNKP-220ENST00000627232 RCE1Q9Y256 329 aa19.53■□□□□ 0.72
PNKP-220ENST00000627232 PINLYPA6NC86 204 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 ORC5O43913 435 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 NEURL1O76050 574 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 ACSM4P0C7M7 580 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 PTH2RP49190 550 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 BTG1P62324 171 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 GRB2P62993 217 aaKnown RBP19.52■□□□□ 0.72
PNKP-220ENST00000627232 TAF13Q15543 124 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 WIPI1Q5MNZ9 446 aaPredicted RBP19.52■□□□□ 0.72
PNKP-220ENST00000627232 TMEM69Q5SWH9 247 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 KRT74Q7RTS7 529 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 C20orf196Q8IYI0 205 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 OR2M7Q8NG81 312 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 NKD1Q969G9 470 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 PARD6AQ9NPB6 346 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 PNRC2Q9NPJ4 139 aaKnown RBP19.52■□□□□ 0.72
PNKP-220ENST00000627232 ZNF275Q9NSD4 429 aaPredicted RBP19.52■□□□□ 0.72
PNKP-220ENST00000627232 ASH2LQ9UBL3 628 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 IL17BQ9UHF5 180 aa19.52■□□□□ 0.72
PNKP-220ENST00000627232 MED12Q93074 2177 aa19.52■□□□□ 0.71
PNKP-220ENST00000627232 A0A0B4J293 547 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 LOC100289279A0A1B0GTE1 492 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 DHHO43323 396 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 WDPCPO95876 746 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 ITGA5P08648 1049 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 CDK2P24941 298 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 CTSSP25774 331 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 ITGA3P26006 1051 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 BTCP35070 178 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 GFRA1P56159 465 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms