RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 ZNF418Q8TF45 676 aaPredicted RBP20.34■□□□□ 0.85
ATXN3-253ENST00000621269 CMBLQ96DG6 245 aa20.34■□□□□ 0.85
ATXN3-253ENST00000621269 FAM107BQ9H098 131 aa20.34■□□□□ 0.85
ATXN3-253ENST00000621269 PURGQ9UJV8 347 aaKnown RBP20.34■□□□□ 0.85
ATXN3-253ENST00000621269 J3QLI3 93 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 CENPAP49450 140 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 SMIM11AP58511 58 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 SEC23BQ15437 767 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 DCAF12L2Q5VW00 463 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 OTPQ5XKR4 325 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 SMARCD3Q6STE5 483 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 FAM86B1Q8N7N1 296 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 OR2Z1Q8NG97 314 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 OR1F12Q8NHA8 337 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 NUAK2Q9H093 628 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 POFUT1Q9H488 388 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 GORASP2Q9H8Y8 452 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 UBAP1Q9NZ09 502 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 POLR1DQ9Y2S0 133 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 STARD10Q9Y365 291 aa20.33■□□□□ 0.85
ATXN3-253ENST00000621269 LOC105371242A0A075B767 164 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 TNFRSF1AP19438 455 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 KITLGP21583 273 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 SPRNQ5BIV9 151 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 DNM1P34Q6PK57 102 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 ST7LQ8TDW4 575 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 SLC7A6Q92536 515 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 PTP4A1Q93096 173 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 HAVCR1Q96D42 359 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 PYURFQ96I23 114 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 DCLRE1CQ96SD1 692 aaKnown RBP20.32■□□□□ 0.84
ATXN3-253ENST00000621269 NSRP1Q9H0G5 558 aaKnown RBP20.32■□□□□ 0.84
ATXN3-253ENST00000621269 NPTNQ9Y639 398 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 V9GYQ6 96 aa20.32■□□□□ 0.84
ATXN3-253ENST00000621269 OR6C6A6NF89 314 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 IMPA2O14732 288 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 VENTXO95231 258 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 GADD45GO95257 159 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 TXNDC12O95881 172 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 AVPP01185 164 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 GATA3P23771 443 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 CRABP1P29762 137 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 CDKN2AP42771 156 aaKnown RBP20.31■□□□□ 0.84
ATXN3-253ENST00000621269 FXYD6P3P58550 94 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 KCNMB1Q16558 191 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 CCDC92Q53HC0 331 aaPredicted RBP20.31■□□□□ 0.84
ATXN3-253ENST00000621269 C1orf229Q6ZS94 237 aaPredicted RBP20.31■□□□□ 0.84
ATXN3-253ENST00000621269 PTCHD4Q6ZW05 846 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 CPLX4Q7Z7G2 160 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 MCUR1Q96AQ8 359 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 DHRS1Q96LJ7 313 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 SAMD8Q96LT4 415 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 ERMAPQ96PL5 475 aaPredicted RBP20.31■□□□□ 0.84
ATXN3-253ENST00000621269 TMPRSS13Q9BYE2 586 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 MAGEL2Q9UJ55 1249 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 PCDHB10Q9UN67 800 aa20.31■□□□□ 0.84
ATXN3-253ENST00000621269 SURF4O15260 269 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 SBK2P0C263 348 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 EPHA1P21709 976 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 RGS6P49758 472 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 SPIBQ01892 262 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 PGM2L1Q6PCE3 622 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.3■□□□□ 0.84
ATXN3-253ENST00000621269 OR5L1Q8NGL2 311 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 FANK1Q8TC84 345 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 ZFAND2BQ8WV99 257 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 GPA33Q99795 319 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 FUZQ9BT04 418 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 TMEM106BQ9NUM4 274 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 ATPIF1Q9UII2 106 aa20.3■□□□□ 0.84
ATXN3-253ENST00000621269 J3QW42 95 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 RER1O15258 196 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 ATP8B1O43520 1251 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 SNX3O60493 162 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 RGS9O75916 674 aaPredicted RBP20.29■□□□□ 0.84
ATXN3-253ENST00000621269 PPP1R3DO95685 299 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 SLC6A6P31641 620 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 LCN2P80188 198 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 RFX4Q33E94 735 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 Q6ZR03 302 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 C1QL2Q7Z5L3 287 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.29■□□□□ 0.84
ATXN3-253ENST00000621269 JAZF1Q86VZ6 243 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 GJC3Q8NFK1 279 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 NANPQ8TBE9 248 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 TSSK2Q96PF2 358 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 C7orf69Q9H7B7 122 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 IL19Q9UHD0 177 aa20.29■□□□□ 0.84
ATXN3-253ENST00000621269 RENP00797 406 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 DBHP09172 617 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 HSD17B1P14061 328 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 RAC2P15153 192 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 LEG1Q6P5S2 330 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 KLHL36Q8N4N3 616 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 SPICQ8N5J4 248 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 SEMA6DQ8NFY4 1073 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 SRA1Q9HD15 236 aaKnown RBP20.28■□□□□ 0.84
ATXN3-253ENST00000621269 PTTG3PQ9NZH4 202 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 PPP1R3CQ9UQK1 317 aa20.28■□□□□ 0.84
ATXN3-253ENST00000621269 OR10H3O60404 316 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms