RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DNASE1P24855 282 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 POLR2HP52434 150 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 KIAA1024LP59773 190 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 B3GNTL1Q67FW5 361 aaPredicted RBP7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 DCXRQ7Z4W1 244 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 VN1R4Q7Z5H5 301 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 CPEB2Q7Z5Q1 589 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 OR4C3Q8NH37 302 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 APH1AQ96BI3 265 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 ABHD1Q96SE0 405 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 TEAD3Q99594 435 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 BANF2Q9H503 90 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 NIPAL2Q9H841 368 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 NXT1Q9UKK6 140 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 TRAPPC2LQ9UL33 140 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 BAIAP2Q9UQB8 552 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 TP53TG5Q9Y2B4 290 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 RANBP2P49792 3224 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 XIRP2A4UGR9 3374 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 TSPAN9O75954 239 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 EML2O95834 649 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 HTR2AP28223 471 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 CLDN15P56746 228 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 TRIP6Q15654 476 aaKnown RBP7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 OR52W1Q6IF63 320 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 SHISA5Q8N114 240 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 OR2T35Q8NGX2 323 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 SECTM1Q8WVN6 248 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 OR14A2Q96R54 314 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 P4HTMQ9NXG6 502 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 FITM1A5D6W6 292 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF587BE7ETH6 402 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 GLULP15104 373 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 DUSP1P28562 367 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 LCN1P31025 176 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 CCR6P51684 374 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 DCAF7P61962 342 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 FZD2Q14332 565 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 GALEQ14376 348 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC9A3R2Q15599 337 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 HES3Q5TGS1 186 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 TMEM205Q6UW68 189 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 CCDC36Q8IYA8 594 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 LIPHQ8WWY8 451 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 HYLS1Q96M11 299 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 PIGQQ9BRB3 760 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 CYSLTR2Q9NS75 346 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 ABRACLQ9P1F3 81 aa7.5□□□□□ -1.21
PTPDC1-204ENST00000620992 TNFRSF10AO00220 468 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 MT-CO3P00414 261 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 H2AFB2P0C5Z0 115 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 YOD1Q5VVQ6 348 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 ELP2Q6IA86 826 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 HEPHL1Q6MZM0 1159 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 PGAP1Q75T13 922 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 PRSS45Q7RTY3 260 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SYNPRQ8TBG9 265 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 PTP4A1Q93096 173 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 FBXO17Q96EF6 278 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SAT2Q96F10 170 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 AIFM2Q9BRQ8 373 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC23A1Q9UHI7 598 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF736B4DX44 427 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 HS3ST1O14792 307 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 ARPC5O15511 151 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 HLA-DQB1P01920 261 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 MT-ND4P03905 459 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 CD14P08571 375 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SBK2P0C263 348 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 OR8U9P0C7N5 309 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF136P52737 540 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 ARHGAP11BQ3KRB8 267 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 TIGD3Q6B0B8 471 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 OR51D1Q8NGF3 324 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 PPP1R35Q8TAP8 253 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 RDH5Q92781 318 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SOSTQ9BQB4 213 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 ZNF649Q9BS31 505 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 TMEM74BQ9NUR3 256 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 CHRNA9Q9UGM1 479 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 WIF1Q9Y5W5 379 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 COL4A3Q01955 1670 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 IGHV1OR15-9A0A0B4J2B8 117 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 FAM90A27PA6NNH2 459 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 M0R296 226 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 P2RX6O15547 441 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 BLVRBP30043 206 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SLC6A1P30531 599 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 DGCR2P98153 550 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 FAM76BQ5HYJ3 339 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 OR2B11Q5JQS5 317 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 FAM69AQ5T7M9 428 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 TMEM244Q5VVB8 128 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 GARNL3Q5VVW2 1013 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 OR10K2Q6IF99 312 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 DVL3Q92997 716 aaPredicted RBP7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 SEC22AQ96IW7 307 aa7.49□□□□□ -1.21
PTPDC1-204ENST00000620992 KCNJ15Q99712 375 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms