RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HIF1ANQ9NWT6 349 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 STARD10Q9Y365 291 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 WIPI2Q9Y4P8 454 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 STAB1Q9NY15 2570 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 OR6C6A6NF89 314 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 CLDN25C9JDP6 229 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 RER1O15258 196 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 TIMM8AO60220 97 aaPredicted RBP14.56□□□□□ -0.08
HMGN3-203ENST00000620514 MSMBP08118 114 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 ADH4P08319 380 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 DBHP09172 617 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 FPR3P25089 353 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 SRP14P37108 136 aaKnown RBP14.56□□□□□ -0.08
HMGN3-203ENST00000620514 KCNMB1Q16558 191 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 HFEQ30201 348 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 LEG1Q6P5S2 330 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 CYP2R1Q6VVX0 501 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 ZDHHC21Q8IVQ6 265 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 OR4K13Q8NH42 304 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 OR1F12Q8NHA8 337 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 CCL17Q92583 94 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 TMEM186Q96B77 213 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 SAMD8Q96LT4 415 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 NMNAT3Q96T66 252 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 ZNF665Q9H7R5 613 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 SRA1Q9HD15 236 aaKnown RBP14.56□□□□□ -0.08
HMGN3-203ENST00000620514 IL1RAPQ9NPH3 570 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 CYSLTR2Q9NS75 346 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 B9D1Q9UPM9 204 aa14.56□□□□□ -0.08
HMGN3-203ENST00000620514 IGLV1-36A0A0B4J1U3 117 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 UBOX5O94941 541 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 HIST1H1CP16403 213 aaKnown RBP14.55□□□□□ -0.08
HMGN3-203ENST00000620514 GSTM3P21266 225 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 ATP6V1B2P21281 511 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 SLC6A6P31641 620 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 GSSP48637 474 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 ERFP50548 548 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 MTX3Q5HYI7 312 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 PGBD2Q6P3X8 592 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 CORO6Q6QEF8 472 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 Q6ZR03 302 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 ZNF771Q7L3S4 317 aaPredicted RBP14.55□□□□□ -0.08
HMGN3-203ENST00000620514 JAZF1Q86VZ6 243 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 OR6V1Q8N148 313 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 FITM2Q8N6M3 262 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 NPEPL1Q8NDH3 523 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 CMBLQ96DG6 245 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 IFT27Q9BW83 186 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 FN3KQ9H479 309 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 DCAF16Q9NXF7 216 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 NDE1Q9NXR1 346 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 PURGQ9UJV8 347 aaKnown RBP14.55□□□□□ -0.08
HMGN3-203ENST00000620514 POLR1DQ9Y2S0 133 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 LHFPL6Q9Y693 200 aa14.55□□□□□ -0.08
HMGN3-203ENST00000620514 ARPC3O15145 178 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 DEAF1O75398 565 aaPredicted RBP14.54□□□□□ -0.08
HMGN3-203ENST00000620514 CD55P08174 381 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 CRABP1P29762 137 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 LIPAP38571 399 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 TNFAIP6P98066 277 aaPredicted RBP14.54□□□□□ -0.08
HMGN3-203ENST00000620514 CDK5R2Q13319 367 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 DNM1P34Q6PK57 102 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 OR51F2Q8NH61 342 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 GNPDA2Q8TDQ7 276 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 REPIN1Q9BWE0 567 aaKnown RBP14.54□□□□□ -0.08
HMGN3-203ENST00000620514 EGLN1Q9GZT9 426 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 CGGBP1Q9UFW8 167 aaPredicted RBP14.54□□□□□ -0.08
HMGN3-203ENST00000620514 ZDHHC8Q9ULC8 765 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 TMCC3Q9ULS5 477 aa14.54□□□□□ -0.08
HMGN3-203ENST00000620514 B2RBV5 119 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 RENP00797 406 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 IGHV2-5P01817 119 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 KITLGP21583 273 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 PCMT1P22061 227 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 IFNGR2P38484 337 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 HIST1H3AP68431 136 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 TSPAN31Q12999 210 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 SPATS1Q496A3 300 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 ZMAT1Q5H9K5 638 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 SLC35F1Q5T1Q4 408 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 HIST2H3PS2Q5TEC6 136 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 ZNF620Q6ZNG0 422 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 HIST2H3AQ71DI3 136 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 SDR9C7Q8NEX9 313 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 SLC26A10Q8NG04 563 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 OR9Q2Q8NGE9 314 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 RAB1CQ92928 201 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 HAVCR1Q96D42 359 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 TIMD4Q96H15 378 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 CCT8L2Q96SF2 557 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 DIRC2Q96SL1 478 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 EGLN3Q9H6Z9 239 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 RPRD1BQ9NQG5 326 aaKnown RBP14.53□□□□□ -0.08
HMGN3-203ENST00000620514 PTTG3PQ9NZH4 202 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 LYVE1Q9Y5Y7 322 aa14.53□□□□□ -0.08
HMGN3-203ENST00000620514 OR6C68A6NDL8 312 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 PLPP2O43688 288 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 TUBG1P23258 451 aa14.52□□□□□ -0.09
HMGN3-203ENST00000620514 PPP1R8Q12972 351 aaKnown RBP14.52□□□□□ -0.09
HMGN3-203ENST00000620514 HLXQ14774 488 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms