RNA–Protein interactions for RNA: ENST00000619989.1

CCL3L3-203, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3L3, Length 784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-203ENST00000619989 MED20Q9H944 212 aa11.8□□□□□ -0.52
CCL3L3-203ENST00000619989 CDH20Q9HBT6 801 aa11.8□□□□□ -0.52
CCL3L3-203ENST00000619989 HINT3Q9NQE9 182 aaKnown RBP11.8□□□□□ -0.52
CCL3L3-203ENST00000619989 FAM118AQ9NWS6 357 aa11.8□□□□□ -0.52
CCL3L3-203ENST00000619989 ASH2LQ9UBL3 628 aa11.8□□□□□ -0.52
CCL3L3-203ENST00000619989 NKX1-2Q9UD57 310 aaPredicted RBP11.8□□□□□ -0.52
CCL3L3-203ENST00000619989 NDRG4Q9ULP0 352 aaKnown RBP11.8□□□□□ -0.52
CCL3L3-203ENST00000619989 H0YJX3 145 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 SGCEO43556 437 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 PRKYO43930 277 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 MPZL1O95297 269 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 MMP7P09237 267 aaPredicted RBP11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 SPARCP09486 303 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 CCL2P13500 99 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 ZNF32P17041 273 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 HSPA13P48723 471 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 PTH2RP49190 550 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 ENTPD1P49961 510 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 GDI2P50395 445 aaKnown RBP11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 POU4F2Q12837 409 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 ECH1Q13011 328 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 IL18R1Q13478 541 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 APOFQ13790 326 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 PABPC1L2AQ5JQF8 200 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 OTPQ5XKR4 325 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 ZNF544Q6NX49 715 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 UGT2A3Q6UWM9 527 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 SHFQ7M4L6 423 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 DTX2Q86UW9 622 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 ZNF584Q8IVC4 421 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 SLC30A7Q8NEW0 376 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 AKR7LQ8NHP1 331 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 IPCEF1Q8WWN9 437 aaPredicted RBP11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 PTP4A1Q93096 173 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 MBOAT4Q96T53 435 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 DDOQ99489 341 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 OR2H1Q9GZK4 316 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 CXXC4Q9H2H0 198 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 CA10Q9NS85 328 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 CBLN4Q9NTU7 201 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 CLN6Q9NWW5 311 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 PLEK2Q9NYT0 353 aa11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 EIF3KQ9UBQ5 218 aaKnown RBP11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCL3L3-203ENST00000619989 H0YAE9 185 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 OVOL3O00110 214 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 SLC16A6O15403 523 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 DOK2O60496 412 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 GPANK1O95872 356 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 GAAP10253 952 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 ZNF35P13682 527 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 CCNOP22674 350 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 NR4A1P22736 598 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 APEX1P27695 318 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 THBS4P35443 961 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 ATP5J2P56134 94 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 SNRPGP62308 76 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 PSG4Q00888 419 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 SNTB2Q13425 540 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 TMED1Q13445 227 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 ENDOGQ14249 297 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 RAB35Q15286 201 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 TAF13Q15543 124 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 MEPCEQ7L2J0 689 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 ERI1Q8IV48 349 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 CPEB3Q8NE35 698 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 TRMT61AQ96FX7 289 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 PITX2Q99697 317 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 HDHD2Q9H0R4 259 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 WARS2Q9UGM6 360 aaKnown RBP11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 TMEM14AQ9Y6G1 99 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 COMMD3-BMI1R4GMX3 469 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 AKAP9Q99996 3911 aa11.78□□□□□ -0.52
CCL3L3-203ENST00000619989 PLCE1Q9P212 2302 aa11.77□□□□□ -0.52
CCL3L3-203ENST00000619989 USF3Q68DE3 2245 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 TVP23AA6NH52 213 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 ZNF593O00488 134 aaPredicted RBP11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 TFP02787 698 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 OR4A8P0C604 315 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 COX5BP10606 129 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 CLUP10909 449 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 STOMP27105 288 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 SERPINF1P36955 418 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 CAPGP40121 348 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 SLC15A1P46059 708 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 HTR5AP47898 357 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 RPS23P62266 143 aaKnown RBP11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 IL5RAQ01344 420 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 ADIPOQQ15848 244 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 MEP1BQ16820 701 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 LRRC75A-AS1Q8N1F1 130 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 PAQR4Q8N4S7 273 aaPredicted RBP11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 NUP37Q8NFH4 326 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 OR6N2Q8NGY6 317 aa11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 ZMYND19Q96E35 227 aaPredicted RBP11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 MYCBPQ99417 103 aaPredicted RBP11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 CNN2Q99439 309 aaKnown RBP11.77□□□□□ -0.53
CCL3L3-203ENST00000619989 TEAD3Q99594 435 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms