RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 RBM34P42696 430 aaKnown RBP3.75□□□□□ -1.81
SNCA-213ENST00000618500 KRTAP10-11P60412 298 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 DSTNP60981 165 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 HIST1H3AP68431 136 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 CKAP4Q07065 602 aaKnown RBP3.75□□□□□ -1.81
SNCA-213ENST00000618500 ZNF74Q16587 644 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 ARMC4Q5T2S8 1044 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 HIST2H3PS2Q5TEC6 136 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 SLC35E4Q6ICL7 350 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 HIST2H3AQ71DI3 136 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 ZNF101Q8IZC7 436 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 CMTM4Q8IZR5 234 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 EIF1ADQ8N9N8 165 aaKnown RBP3.75□□□□□ -1.81
SNCA-213ENST00000618500 OR13G1Q8NGZ3 307 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 OR2T6Q8NHC8 308 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 GEMIN6Q8WXD5 167 aaKnown RBP3.75□□□□□ -1.81
SNCA-213ENST00000618500 C12orf43Q96C57 262 aaKnown RBP3.75□□□□□ -1.81
SNCA-213ENST00000618500 SH3GL3Q99963 347 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 SPATA5L1Q9BVQ7 753 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 SERTAD4Q9NUC0 356 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 UBAP1Q9NZ09 502 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 RPUSD1Q9UJJ7 312 aaKnown RBP3.75□□□□□ -1.81
SNCA-213ENST00000618500 LRP12Q9Y561 859 aa3.75□□□□□ -1.81
SNCA-213ENST00000618500 HECTD4Q9Y4D8 3996 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 OR6C6A6NF89 314 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CCDC154A6NI56 674 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 NKX6-3A6NJ46 265 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 MPIG6BO95866 241 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 OPN1SWP03999 348 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 QDPRP09417 244 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 PRG2P13727 222 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 ACADSP16219 412 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CD33P20138 364 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 EFNA1P20827 205 aaPredicted RBP3.74□□□□□ -1.81
SNCA-213ENST00000618500 ETV4P43268 484 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CCT5P48643 541 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 PSG4Q00888 419 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 MZT1Q08AG7 82 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 KCNMB1Q16558 191 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 LRRC75BQ2VPJ9 315 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CDONQ4KMG0 1287 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 ALG10BQ5I7T1 473 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 NKAPLQ5M9Q1 402 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 ATPAF1Q5TC12 328 aaPredicted RBP3.74□□□□□ -1.81
SNCA-213ENST00000618500 PGBD2Q6P3X8 592 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 C16orf82Q7Z2V1 217 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CLIP4Q8N3C7 705 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 SCCPDHQ8NBX0 429 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 OR5L1Q8NGL2 311 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 DPF1Q92782 380 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 ITFG2Q969R8 447 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 SLC25A36Q96CQ1 311 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 MPP4Q96JB8 637 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 FMO2Q99518 471 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 COQ7Q99807 217 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 MMP28Q9H239 520 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 DCAF16Q9NXF7 216 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 A4GNTQ9UNA3 340 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 LSM4Q9Y4Z0 139 aaKnown RBP3.74□□□□□ -1.81
SNCA-213ENST00000618500 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
SNCA-213ENST00000618500 MEGF11A6BM72 1044 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 E9PBE3 544 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 GKN3PP0CG01 181 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 BGNP21810 368 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 AZGP1P25311 298 aaKnown RBP3.74□□□□□ -1.81
SNCA-213ENST00000618500 CLRN1P58418 232 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 PGS1Q32NB8 556 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CLEC12AQ5QGZ9 265 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 INTS11Q5TA45 600 aaKnown RBP3.74□□□□□ -1.81
SNCA-213ENST00000618500 CARD17Q5XLA6 110 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 PGM2L1Q6PCE3 622 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 COLCA1Q6ZS62 124 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 OLIG3Q7RTU3 272 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 VMO1Q7Z5L0 202 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 OR2Z1Q8NG97 314 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 ABHD4Q8TB40 342 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 SLC38A5Q8WUX1 472 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 TAF15Q92804 592 aaKnown RBP eCLIP3.74□□□□□ -1.81
SNCA-213ENST00000618500 CDADC1Q9BWV3 514 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CNTD2Q9H8S5 307 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 SELENONQ9NZV5 590 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 CTSZQ9UBR2 303 aa3.74□□□□□ -1.81
SNCA-213ENST00000618500 TRAV38-1A0A0B4J264 116 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 WI2-2373I1.2A0A1W2PRP0 233 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 C5orf49A4QMS7 147 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 TMEM247A6NEH6 219 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 RIPK2O43353 540 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 TRMUO75648 421 aaKnown RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 IRF2P14316 349 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 ZNF32P17041 273 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 GSTT1P30711 240 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 ERVK-25P63136 954 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 CD83Q01151 205 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 SCRN3Q0VDG4 424 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 ENDOGQ14249 297 aaKnown RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 ZCCHC23Q6ZST2 131 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 RANBP3LQ86VV4 465 aaPredicted RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 C10orf107Q8IVU9 208 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 SLC30A8Q8IWU4 369 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 CLDN22Q8N7P3 220 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms