RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CFAP77Q6ZQR2 320 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 GLRX5Q86SX6 157 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 CATSPERDQ86XM0 798 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 HAVCR1Q96D42 359 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 SLAMF6Q96DU3 332 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 ZC3H10Q96K80 434 aaKnown RBP11.05□□□□□ -0.64
CIITA-212ENST00000618207 SPACA5Q96QH8 159 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 POTEKPQ9BYX7 375 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 KLHL9Q9P2J3 617 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 ASH2LQ9UBL3 628 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 ZNF432O94892 652 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 TAGLNQ01995 201 aaKnown RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 ROM1Q03395 351 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 ZP4Q12836 540 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 KLF9Q13886 244 aaPredicted RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 RSPO4Q2I0M5 234 aaPredicted RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 Q5BKY6 102 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 IDO2Q6ZQW0 420 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 OR1J4Q8NGS1 313 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 OR8S1Q8NH09 359 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 MIB2Q96AX9 1013 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 SOX7Q9BT81 388 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 ATG5Q9H1Y0 275 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 HRASLSQ9HDD0 168 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 LOXL2Q9Y4K0 774 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 A0A0G2JMM0 328 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 A0A1W2PPB8 328 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 A0A1W2PRS3 328 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 LNP1A1A4G5 178 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 ZNF726A6NNF4 738 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 KIR3DP1A8MWS1 328 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 RER1O15258 196 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 DKK1O94907 266 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 WDPCPO95876 746 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 RAF1P04049 648 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 QDPRP09417 244 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 ANOS1P23352 680 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 SLC22A10Q63ZE4 541 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 OPN5Q6U736 354 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 TIPARPQ7Z3E1 657 aaKnown RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 YRDCQ86U90 279 aaKnown RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 BIVMQ86UB2 503 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 FAM3DQ96BQ1 224 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 FGGYQ96C11 551 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.04□□□□□ -0.64
CIITA-212ENST00000618207 ING3Q9NXR8 418 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 CKLFQ9UBR5 152 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 DKKL1Q9UK85 242 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 HHLA2Q9UM44 414 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 R4GMQ9 66 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 FRYQ5TBA9 3013 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 A0A1W2PQ72 361 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 TRAF3IP2O43734 574 aaPredicted RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 IGHG1P01857 330 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 H2AFB2P0C5Z0 115 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 CXCL3P19876 107 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 CCR9P51686 369 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 TAF13Q15543 124 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 SGCAQ16586 387 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 DCAF12Q5T6F0 453 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 ZNF627Q7L945 461 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 DTWD2Q8NBA8 298 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 OR10S1Q8NGN2 331 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 DVL3Q92997 716 aaPredicted RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 FAM46BQ96A09 425 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 MFRPQ9BY79 579 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 OR2B2Q9GZK3 357 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 G6PC2Q9NQR9 355 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 ELF5Q9UKW6 265 aaPredicted RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 PADI1Q9ULC6 663 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 MRPS18BQ9Y676 258 aaKnown RBP11.04□□□□□ -0.64
CIITA-212ENST00000618207 R4GN57 208 aa11.04□□□□□ -0.64
CIITA-212ENST00000618207 LOC102723996A0A087X1L8 192 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 OR2M5A3KFT3 312 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 GABARAPH6UMI1 98 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 AKR7A2O43488 359 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 TSC22D2O75157 780 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 ONECUT2O95948 504 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 YES1P07947 543 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 CALCBP10092 127 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 LAP3P28838 519 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 VEGFCP49767 419 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 OC90Q02509 493 aaPredicted RBP11.03□□□□□ -0.64
CIITA-212ENST00000618207 RAB11BQ15907 218 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 KLHL24Q6TFL4 600 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 LRRC18Q8N456 261 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 RNF138Q8WVD3 245 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 SNX18Q96RF0 628 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 NCKAP5O14513 1909 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 PCP4L1A6NKN8 68 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 SSNA1O43805 119 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 S100A6P06703 90 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 RAB40ALP0C0E4 278 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 JMJD7P0C870 316 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 PGA4P0DJD7 388 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 PGA3P0DJD8 388 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 HSD11B1P28845 292 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 RFC3P40938 356 aa11.03□□□□□ -0.64
CIITA-212ENST00000618207 P2RY4P51582 365 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms