RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 GP6Q9HCN6 339 aa10.84□□□□□ -0.67
CBWD1-220ENST00000612045 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
CBWD1-220ENST00000612045 TMEM38BQ9NVV0 291 aa10.84□□□□□ -0.67
CBWD1-220ENST00000612045 GTF2A1LQ9UNN4 478 aa10.84□□□□□ -0.67
CBWD1-220ENST00000612045 SLC22A13Q9Y226 551 aa10.84□□□□□ -0.67
CBWD1-220ENST00000612045 TP53TG5Q9Y2B4 290 aa10.84□□□□□ -0.67
CBWD1-220ENST00000612045 A0A075B6Q4 140 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 TMEM269A0A1B0GVZ9 245 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 ARL6IP5O75915 188 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 KRT33AO76009 404 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 NCR1O76036 304 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 MYL9P24844 172 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 MAGEB1P43366 347 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 MMP16P51512 607 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 ROR2Q01974 943 aaKnown RBP10.83□□□□□ -0.68
CBWD1-220ENST00000612045 ZNF829Q3KNS6 432 aaPredicted RBP10.83□□□□□ -0.68
CBWD1-220ENST00000612045 Q499Y3 187 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 PPP1R14AQ96A00 147 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 APH1AQ96BI3 265 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 KCNS3Q9BQ31 491 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 G6PC2Q9NQR9 355 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 SLC7A10Q9NS82 523 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 CLCF1Q9UBD9 225 aa10.83□□□□□ -0.68
CBWD1-220ENST00000612045 PLEKHB1Q9UF11 243 aaPredicted RBP10.83□□□□□ -0.68
CBWD1-220ENST00000612045 PIEZO2Q9H5I5 2752 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 TRAV1-2A0A0B4J238 106 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 TRBV5-5A0A0J9YX44 114 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 ACOD1A6NK06 481 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 LOC110117498-PIK3R3F6TDL0 507 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 CRYABP02511 175 aaKnown RBP10.82□□□□□ -0.68
CBWD1-220ENST00000612045 CST2P09228 141 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 OCM2P0CE71 109 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 B4GALT1P15291 398 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 AGTR1P30556 359 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 HIST1H3AP68431 136 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 TAF13Q15543 124 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 HSD17B12Q53GQ0 312 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 HIST2H3PS2Q5TEC6 136 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 KLHL24Q6TFL4 600 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 HIST2H3AQ71DI3 136 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 NUFIP2Q7Z417 695 aaKnown RBP10.82□□□□□ -0.68
CBWD1-220ENST00000612045 P4HA3Q7Z4N8 544 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 TPRA1Q86W33 373 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 OR5M9Q8NGP3 310 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 GPR148Q8TDV2 347 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 FBXO17Q96EF6 278 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 DERL3Q96Q80 235 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 FOXB1Q99853 325 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 NIPAL2Q9H841 368 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 NOX4Q9NPH5 578 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 AKIP1Q9NQ31 210 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 FAM206AQ9NX38 181 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 LUZP4Q9P127 313 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 OR52A1Q9UKL2 312 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 FREM1Q5H8C1 2179 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 NCOR2Q9Y618 2525 aa10.82□□□□□ -0.68
CBWD1-220ENST00000612045 IQCMA0A1B0GVH7 501 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 OR14I1A6ND48 311 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 ZNF587BE7ETH6 402 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 RPL36A-HNRNPH2H7BZ11 118 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 PIN1P1O15428 100 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 HSD11B1P28845 292 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 STK11Q15831 433 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 NR2C2APQ86WQ0 139 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 ZNF100Q8IYN0 542 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 SLC22A24Q8N4F4 322 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 OR51A4Q8NGJ6 313 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 OR10AC1Q8NH08 325 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 S100ZQ8WXG8 99 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 GMPPAQ96IJ6 420 aaPredicted RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 TRIB1Q96RU8 372 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 SH3GL3Q99963 347 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 SMURF1Q9HCE7 757 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 DDX28Q9NUL7 540 aaKnown RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 CRNNQ9UBG3 495 aaPredicted RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 PEX16Q9Y5Y5 336 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 CLDN25C9JDP6 229 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 H3BSH0 61 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 CTDSP2O14595 271 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 BMP4P12644 408 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 SRMP19623 302 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 MAPK3P27361 379 aaPredicted RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 S100A5P33763 92 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 SOX2P48431 317 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 PSMA6P60900 246 aaKnown RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 GRB2P62993 217 aaKnown RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 CXADRP78310 365 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 DYNC1I2Q13409 638 aaKnown RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 CCDC92Q53HC0 331 aaPredicted RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 BCL2L15Q5TBC7 163 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 SNRNP27Q8WVK2 155 aaKnown RBP10.81□□□□□ -0.68
CBWD1-220ENST00000612045 AP3S1Q92572 193 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 GPR137Q96N19 417 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 ATF6BQ99941 703 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 HMG20AQ9NP66 347 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 GLRX2Q9NS18 164 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 UPB1Q9UBR1 384 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 SLC5A6Q9Y289 635 aa10.81□□□□□ -0.68
CBWD1-220ENST00000612045 MED12LQ86YW9 2145 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms